Analysis of interatomic Contacts of Structural Units in PDB entry:
4FJ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FJ3 entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 4FJ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2SER 230
B
 ASP 2SER 230
P
 HIS 230TYR 232
P
 THR 234THR 258
P
 THR 260VAL 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4FJ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 16Right-handed alpha
Helix 2
2
A
18 31Right-handed alpha
Helix 3
3
A
37 68Right-handed alpha
Helix 4
4
A
74 104Right-handed alpha
Helix 5
5
A
104 109Right-handed alpha
Helix 6
6
A
111 132Right-handed alpha
Helix 7
7
A
138 160Right-handed alpha
Helix 8
8
A
164 181Right-handed alpha
Helix 9
9
A
184 202Right-handed alpha
Helix 10
10
A
211 230Right-handed alpha
Helix 11
11
B
3 16Right-handed alpha
Helix 12
12
B
18 32Right-handed alpha
Helix 13
13
B
37 69Right-handed alpha
Helix 14
14
B
73 104Right-handed alpha
Helix 15
15
B
104 109Right-handed alpha
Helix 16
16
B
111 132Right-handed alpha
Helix 17
17
B
138 160Right-handed alpha
Helix 18
18
B
164 181Right-handed alpha
Helix 19
19
B
184 202Right-handed alpha
Helix 20
20
B
207 209Right-handed 310
Helix 21
21
B
210 230Right-handed alpha
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There are no sheets in PDB entry 4FJ3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il