Analysis of interatomic Contacts of Structural Units in PDB entry:
4FK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FK7 entry

There is 1 chain in PDB entry 4FK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 242LEU 469
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4FK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
249 261Right-handed alpha
Helix 2
2
A
261 267Right-handed alpha
Helix 3
3
A
269 281Right-handed alpha
Helix 4
4
A
285 293Right-handed alpha
Helix 5
5
A
313 330Right-handed alpha
Helix 6
6
A
344 353Right-handed 310
Helix 7
7
A
364 376Right-handed alpha
Helix 8
8
A
395 399Right-handed 310
Helix 9
9
A
421 424Right-handed 310
Helix 10
10
A
426 429Right-handed 310
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There are 3 sheets in PDB entry 4FK7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 343first strand
Strand 2
A
405 411anti-parallel
Strand 3
A
460 468parallel
Strand 4
A
438 448anti-parallel
Strand 5
A
379 382anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 359first strand
Strand 2
A
362 363anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 389first strand
Strand 2
A
431 434anti-parallel
Strand 3
A
417 419anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il