Analysis of interatomic Contacts of Structural Units in PDB entry:
4FO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FO0 entry

There is 1 chain in PDB entry 4FO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32TRP 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4FO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 120Right-handed alpha
Helix 2
2
A
132 141Right-handed alpha
Helix 3
3
A
168 173Right-handed alpha
Helix 4
4
A
201 219Right-handed alpha
Helix 5
5
A
224 229Right-handed 310
Helix 6
6
A
242 255Right-handed alpha
Helix 7
7
A
266 274Right-handed alpha
Helix 8
8
A
310 325Right-handed alpha
Helix 9
9
A
337 351Right-handed alpha
Helix 10
10
A
383 393Right-handed alpha
Helix 11
11
A
503 507Right-handed alpha
Helix 12
12
A
511 521Right-handed alpha
Helix 13
13
A
525 533Right-handed alpha
Helix 14
14
A
547 559Right-handed alpha
Helix 15
15
A
561 567Right-handed alpha
Helix 16
16
A
583 594Right-handed alpha
Helix 17
17
A
596 601Right-handed 310
Helix 18
18
A
605 611Right-handed alpha
Helix 19
19
A
613 620Right-handed alpha
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There are 4 sheets in PDB entry 4FO0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
57 62anti-parallel
Strand 3
A
48 54anti-parallel
Strand 4
A
231 236parallel
Strand 5
A
260 265parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 167first strand
Strand 2
A
75 79anti-parallel
Strand 3
A
180 184anti-parallel
Strand 4
A
86 91parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 149first strand
Strand 2
A
374 381anti-parallel
Strand 3
A
361 367anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 409first strand
Strand 2
A
304 307anti-parallel
Strand 3
A
289 295anti-parallel
Strand 4
A
278 284anti-parallel
Strand 5
A
534 538parallel
Strand 6
A
570 574parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il