Analysis of interatomic Contacts of Structural Units in PDB entry:
4FOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FOV entry

There is 1 chain in PDB entry 4FOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 39THR 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 4FOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 62Right-handed alpha
Helix 2
2
A
63 65Right-handed 310
Helix 3
3
A
216 221Right-handed alpha
Helix 4
4
A
691 696Right-handed alpha
Back to top of page

There are 15 sheets in PDB entry 4FOV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 51first strand
Strand 2
A
202 211anti-parallel
Strand 3
A
70 77anti-parallel
Strand 4
A
144 151anti-parallel
Strand 5
A
156 161anti-parallel
Strand 6
A
164 170anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
185 188anti-parallel
Strand 3
A
84 91anti-parallel
Strand 4
A
101 107anti-parallel
Strand 5
A
112 118anti-parallel
Strand 6
A
123 129anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
140 141anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
196 198anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
250 251anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
275 282anti-parallel
Strand 4
A
293 296anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 476first strand
Strand 2
A
458 464anti-parallel
Strand 3
A
339 346anti-parallel
Strand 4
A
324 332anti-parallel
Strand 5
A
493 494parallel
Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 365first strand
Strand 2
A
368 375anti-parallel
Strand 3
A
383 385anti-parallel
Strand 4
A
390 393anti-parallel
Strand 5
A
399 404anti-parallel
Strand 6
A
410 412anti-parallel
Strand 7
A
415 416anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 365first strand
Strand 2
A
368 375anti-parallel
Strand 3
A
451 452anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 425first strand
Strand 2
A
432 441anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
508 510anti-parallel
Strand 3
A
513 519anti-parallel
Strand 4
A
504 506anti-parallel
Strand 5
A
496 497anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 490first strand
Strand 2
A
508 510anti-parallel
Strand 3
A
513 519anti-parallel
Strand 4
A
527 532anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
542 548first strand
Strand 2
A
551 556anti-parallel
Strand 3
A
564 568anti-parallel
Strand 4
A
579 580anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 597first strand
Strand 2
A
607 613anti-parallel
Strand 3
A
622 629anti-parallel
Strand 4
A
636 643anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 658first strand
Strand 2
A
664 669anti-parallel
Strand 3
A
685 690anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il