Analysis of interatomic Contacts of Structural Units in PDB entry:
4FW8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4FW8 entry

There are 4 chains in PDB entry 4FW8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 20	ALA 454
B	SER 20	ALA 454
C	PRO 29	ALA 454
D	PRO 29	ARG 154

There are 73 helices in PDB entry 4FW8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	56	65	Right-handed alpha
Helix 2	2	A	95	98	Right-handed 310
Helix 3	3	A	99	110	Right-handed alpha
Helix 4	4	A	126	129	Right-handed 310
Helix 5	5	A	131	150	Right-handed alpha
Helix 6	6	A	171	173	Right-handed 310
Helix 7	7	A	174	182	Right-handed alpha
Helix 8	8	A	223	237	Right-handed alpha
Helix 9	9	A	245	249	Right-handed 310
Helix 10	10	A	250	260	Right-handed alpha
Helix 11	11	A	272	283	Right-handed alpha
Helix 12	12	A	303	307	Right-handed 310
Helix 13	13	A	308	320	Right-handed alpha
Helix 14	14	A	320	333	Right-handed alpha
Helix 15	15	A	347	353	Right-handed alpha
Helix 16	16	A	357	380	Right-handed alpha
Helix 17	17	A	402	412	Right-handed alpha
Helix 18	18	A	420	433	Right-handed alpha
Helix 19	19	B	21	27	Right-handed alpha
Helix 20	20	B	56	65	Right-handed alpha
Helix 21	21	B	95	98	Right-handed 310
Helix 22	22	B	99	111	Right-handed alpha
Helix 23	23	B	126	129	Right-handed 310
Helix 24	24	B	131	150	Right-handed alpha
Helix 25	25	B	174	182	Right-handed alpha
Helix 26	26	B	223	236	Right-handed alpha
Helix 27	27	B	245	247	Right-handed 310
Helix 28	28	B	248	260	Right-handed alpha
Helix 29	29	B	272	286	Right-handed alpha
Helix 30	30	B	303	307	Right-handed 310
Helix 31	31	B	308	320	Right-handed alpha
Helix 32	32	B	320	333	Right-handed alpha
Helix 33	33	B	347	353	Right-handed alpha
Helix 34	34	B	357	380	Right-handed alpha
Helix 35	35	B	402	412	Right-handed alpha
Helix 36	36	B	420	433	Right-handed alpha
Helix 37	37	B	434	437	Right-handed 310
Helix 38	38	C	56	64	Right-handed alpha
Helix 39	39	C	95	98	Right-handed 310
Helix 40	40	C	99	111	Right-handed alpha
Helix 41	41	C	126	129	Right-handed 310
Helix 42	42	C	131	150	Right-handed alpha
Helix 43	43	C	171	173	Right-handed 310
Helix 44	44	C	174	182	Right-handed alpha
Helix 45	45	C	223	236	Right-handed alpha
Helix 46	46	C	245	248	Right-handed 310
Helix 47	47	C	249	259	Right-handed alpha
Helix 48	48	C	272	286	Right-handed alpha
Helix 49	49	C	303	307	Right-handed 310
Helix 50	50	C	308	320	Right-handed alpha
Helix 51	51	C	320	333	Right-handed alpha
Helix 52	52	C	348	353	Right-handed alpha
Helix 53	53	C	357	381	Right-handed alpha
Helix 54	54	C	403	405	Right-handed 310
Helix 55	55	C	406	412	Right-handed alpha
Helix 56	56	C	420	433	Right-handed alpha
Helix 57	57	D	56	64	Right-handed alpha
Helix 58	58	D	95	98	Right-handed 310
Helix 59	59	D	99	110	Right-handed alpha
Helix 60	60	D	126	129	Right-handed 310
Helix 61	61	D	131	150	Right-handed alpha
Helix 62	62	D	174	182	Right-handed alpha
Helix 63	63	D	223	236	Right-handed alpha
Helix 64	64	D	252	260	Right-handed alpha
Helix 65	65	D	272	286	Right-handed alpha
Helix 66	66	D	303	307	Right-handed 310
Helix 67	67	D	308	320	Right-handed alpha
Helix 68	68	D	320	334	Right-handed alpha
Helix 69	69	D	347	353	Right-handed alpha
Helix 70	70	D	357	381	Right-handed alpha
Helix 71	71	D	402	407	Right-handed alpha
Helix 72	72	D	420	433	Right-handed alpha
Helix 73	73	D	434	437	Right-handed 310

There are 8 sheets in PDB entry 4FW8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	52	first strand
Strand 2	A	83	89	parallel
Strand 3	A	113	124	parallel
Strand 4	A	157	163	parallel
Strand 5	A	192	196	parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	265	first strand
Strand 2	A	239	244	parallel
Strand 3	A	215	219	parallel
Strand 4	A	289	294	parallel
Strand 5	A	336	345	parallel
Strand 6	A	384	390	parallel
Strand 7	A	443	446	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	52	first strand
Strand 2	B	83	89	parallel
Strand 3	B	113	124	parallel
Strand 4	B	157	163	parallel
Strand 5	B	192	196	parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	265	first strand
Strand 2	B	239	244	parallel
Strand 3	B	215	218	parallel
Strand 4	B	291	294	parallel
Strand 5	B	341	345	parallel
Strand 6	B	384	390	parallel
Strand 7	B	443	446	parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	52	first strand
Strand 2	C	83	89	parallel
Strand 3	C	113	124	parallel
Strand 4	C	157	163	parallel
Strand 5	C	192	196	parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	265	first strand
Strand 2	C	238	244	parallel
Strand 3	C	214	219	parallel
Strand 4	C	291	294	parallel
Strand 5	C	341	345	parallel
Strand 6	C	384	390	parallel
Strand 7	C	443	446	parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	51	first strand
Strand 2	D	83	89	parallel
Strand 3	D	113	124	parallel
Strand 4	D	157	163	parallel
Strand 5	D	192	196	parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	265	first strand
Strand 2	D	239	244	parallel
Strand 3	D	215	218	parallel
Strand 4	D	289	294	parallel
Strand 5	D	336	345	parallel
Strand 6	D	384	390	parallel
Strand 7	D	443	446	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4FW8

Analysis of interatomic Contacts of Structural Units in PDB entry:
4FW8