Analysis of interatomic Contacts of Structural Units in PDB entry:
4G17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G17 entry

There is 1 chain in PDB entry 4G17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 33VAL 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4G17. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
82 94Right-handed alpha
Helix 2
2
A
122 130Right-handed alpha
Helix 3
3
A
135 155Right-handed alpha
Helix 4
4
A
164 166Right-handed 310
Helix 5
5
A
217 222Right-handed alpha
Helix 6
6
A
227 245Right-handed alpha
Helix 7
7
A
256 271Right-handed alpha
Helix 8
8
A
272 277Right-handed alpha
Helix 9
9
A
280 292Right-handed alpha
Helix 10
10
A
300 316Right-handed alpha
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There are 3 sheets in PDB entry 4G17. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
38 39first strand
Strand 2
A
43 48anti-parallel
Strand 3
A
57 62anti-parallel
Strand 4
A
67 75anti-parallel
Strand 5
A
111 117anti-parallel
Strand 6
A
102 108anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
158 159first strand
Strand 2
A
190 191anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
168 169first strand
Strand 2
A
182 183anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il