Analysis of interatomic Contacts of Structural Units in PDB entry:
4G6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G6G entry

There are 2 chains in PDB entry 4G6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 36LEU 513
B
 THR 42LEU 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 4G6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 72Right-handed alpha
Helix 2
2
A
91 97Right-handed 310
Helix 3
3
A
103 106Right-handed 310
Helix 4
4
A
111 117Right-handed alpha
Helix 5
5
A
134 136Right-handed 310
Helix 6
6
A
187 192Right-handed alpha
Helix 7
7
A
197 218Right-handed alpha
Helix 8
8
A
222 229Right-handed alpha
Helix 9
9
A
237 254Right-handed alpha
Helix 10
10
A
254 259Right-handed alpha
Helix 11
11
A
259 266Right-handed alpha
Helix 12
12
A
282 296Right-handed alpha
Helix 13
13
A
344 354Right-handed alpha
Helix 14
14
A
355 358Right-handed 310
Helix 15
15
A
392 411Right-handed alpha
Helix 16
16
A
427 434Right-handed alpha
Helix 17
17
A
472 486Right-handed alpha
Helix 18
18
A
488 503Right-handed alpha
Helix 19
19
B
62 72Right-handed alpha
Helix 20
20
B
91 97Right-handed 310
Helix 21
21
B
103 106Right-handed 310
Helix 22
22
B
111 117Right-handed alpha
Helix 23
23
B
134 136Right-handed 310
Helix 24
24
B
187 192Right-handed alpha
Helix 25
25
B
197 218Right-handed alpha
Helix 26
26
B
222 229Right-handed alpha
Helix 27
27
B
237 254Right-handed alpha
Helix 28
28
B
254 259Right-handed alpha
Helix 29
29
B
259 266Right-handed alpha
Helix 30
30
B
282 296Right-handed alpha
Helix 31
31
B
344 354Right-handed alpha
Helix 32
32
B
355 358Right-handed 310
Helix 33
33
B
392 411Right-handed alpha
Helix 34
34
B
413 419Right-handed alpha
Helix 35
35
B
430 434Right-handed alpha
Helix 36
36
B
472 486Right-handed alpha
Helix 37
37
B
488 503Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 4G6G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
165 168parallel
Strand 3
A
138 149anti-parallel
Strand 4
A
122 133anti-parallel
Strand 5
A
78 82parallel
Strand 6
A
55 59parallel
Strand 7
A
171 174parallel
Strand 8
A
378 380parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
108 110anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
341 343anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
334 337parallel
Strand 3
A
230 234parallel
Strand 4
A
267 271parallel
Strand 5
A
299 301parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 309first strand
Strand 2
A
313 319anti-parallel
Strand 3
A
325 331anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
385 386parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 449first strand
Strand 2
A
455 461anti-parallel
Strand 3
A
464 471anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
165 168parallel
Strand 3
B
138 149anti-parallel
Strand 4
B
122 133anti-parallel
Strand 5
B
78 83parallel
Strand 6
B
55 59parallel
Strand 7
B
171 174parallel
Strand 8
B
378 380parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 89first strand
Strand 2
B
108 110anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 180first strand
Strand 2
B
341 343anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
B
334 337parallel
Strand 3
B
230 234parallel
Strand 4
B
267 271parallel
Strand 5
B
299 301parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 309first strand
Strand 2
B
313 319anti-parallel
Strand 3
B
325 331anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
364 365first strand
Strand 2
B
385 386parallel
Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
445 449first strand
Strand 2
B
455 461anti-parallel
Strand 3
B
464 471anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il