Analysis of interatomic Contacts of Structural Units in PDB entry:
4GBR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GBR entry

There are 2 chains in PDB entry 4GBR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 29LEU 314
B
 ASN 1002ALA 1163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4GBR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 61Right-handed alpha
Helix 2
2
A
66 86Right-handed alpha
Helix 3
3
A
86 97Right-handed alpha
Helix 4
4
A
101 136Right-handed alpha
Helix 5
5
A
146 171Right-handed alpha
Helix 6
6
A
178 187Right-handed alpha
Helix 7
7
A
196 208Right-handed alpha
Helix 8
8
A
208 231Right-handed alpha
Helix 9
9
A
237 271Right-handed alpha
Helix 10
10
A
276 290Right-handed alpha
Helix 11
11
A
292 298Right-handed alpha
Helix 12
12
A
301 312Right-handed alpha
Helix 13
13
B
1003 1011Right-handed alpha
Helix 14
14
B
1038 1050Right-handed alpha
Helix 15
15
B
1059 1081Right-handed alpha
Helix 16
16
B
1083 1091Right-handed alpha
Helix 17
17
B
1092 1113Right-handed alpha
Helix 18
18
B
1114 1122Right-handed alpha
Helix 19
19
B
1125 1135Right-handed alpha
Helix 20
20
B
1136 1142Right-handed alpha
Helix 21
21
B
1142 1156Right-handed alpha
Helix 22
22
B
1157 1161Right-handed 310
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There is 1 sheet ( A) in PDB entry 4GBR.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1014 1019first strand
Strand 2
B
1025 1028anti-parallel
Strand 3
B
1031 1034anti-parallel
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