Analysis of interatomic Contacts of Structural Units in PDB entry:
4GLM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GLM entry

There are 4 chains in PDB entry 4GLM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 245ALA 302
B
 LEU 245PRO 301
C
 THR 246PRO 301
D
 LEU 245PRO 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4GLM

There are 4 sheets in PDB entry 4GLM. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 293first strand
Strand 2
A
280 285anti-parallel
Strand 3
A
269 275anti-parallel
Strand 4
A
246 250anti-parallel
Strand 5
A
297 301anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 293first strand
Strand 2
B
280 285anti-parallel
Strand 3
B
269 275anti-parallel
Strand 4
B
247 250anti-parallel
Strand 5
B
297 300anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 293first strand
Strand 2
C
280 285anti-parallel
Strand 3
C
269 275anti-parallel
Strand 4
C
247 250anti-parallel
Strand 5
C
297 300anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
288 293first strand
Strand 2
D
280 285anti-parallel
Strand 3
D
269 275anti-parallel
Strand 4
D
247 250anti-parallel
Strand 5
D
297 300anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il