Analysis of interatomic Contacts of Structural Units in PDB entry:
4H11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4H11 entry

There are 2 chains in PDB entry 4H11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 91ILE 192
B
 SER 91ILE 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4H11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
120 124Right-handed 310
Helix 2
2
A
136 142Right-handed alpha
Helix 3
3
A
162 173Right-handed alpha
Helix 4
4
B
136 142Right-handed alpha
Helix 5
5
B
162 172Right-handed alpha
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There are 4 sheets in PDB entry 4H11. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 102first strand
Strand 2
A
176 184anti-parallel
Strand 3
A
149 153anti-parallel
Strand 4
A
127 132anti-parallel
Strand 5
A
110 113anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 102first strand
Strand 2
A
176 184anti-parallel
Strand 3
A
149 153anti-parallel
Strand 4
A
156 157anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 102first strand
Strand 2
B
176 184anti-parallel
Strand 3
B
149 153anti-parallel
Strand 4
B
127 132anti-parallel
Strand 5
B
110 114anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 102first strand
Strand 2
B
176 184anti-parallel
Strand 3
B
149 153anti-parallel
Strand 4
B
156 157anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il