Analysis of interatomic Contacts of Structural Units in PDB entry:
4HGV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HGV entry

There are 4 chains in PDB entry 4HGV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13ALA 473
B
 SER 13PRO 472
C
 SER 13PRO 472
D
 SER 13PRO 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 4HGV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 43Right-handed alpha
Helix 2
2
A
51 72Right-handed alpha
Helix 3
3
A
76 92Right-handed alpha
Helix 4
4
A
95 99Right-handed 310
Helix 5
5
A
109 128Right-handed alpha
Helix 6
6
A
149 169Right-handed alpha
Helix 7
7
A
169 189Right-handed alpha
Helix 8
8
A
207 228Right-handed alpha
Helix 9
9
A
228 233Right-handed alpha
Helix 10
10
A
251 265Right-handed alpha
Helix 11
11
A
273 280Right-handed alpha
Helix 12
12
A
281 309Right-handed alpha
Helix 13
13
A
337 363Right-handed alpha
Helix 14
14
A
371 397Right-handed alpha
Helix 15
15
A
398 401Right-handed 310
Helix 16
16
A
404 415Right-handed alpha
Helix 17
17
A
416 421Right-handed 310
Helix 18
18
A
422 427Right-handed alpha
Helix 19
19
A
427 442Right-handed alpha
Helix 20
20
A
444 451Right-handed alpha
Helix 21
21
A
456 464Right-handed alpha
Helix 22
22
A
465 469Right-handed 310
Helix 23
23
B
33 43Right-handed alpha
Helix 24
24
B
51 72Right-handed alpha
Helix 25
25
B
76 92Right-handed alpha
Helix 26
26
B
95 99Right-handed 310
Helix 27
27
B
109 128Right-handed alpha
Helix 28
28
B
149 169Right-handed alpha
Helix 29
29
B
169 188Right-handed alpha
Helix 30
30
B
207 233Right-handed alpha
Helix 31
31
B
251 265Right-handed alpha
Helix 32
32
B
273 280Right-handed alpha
Helix 33
33
B
281 309Right-handed alpha
Helix 34
34
B
337 363Right-handed alpha
Helix 35
35
B
371 397Right-handed alpha
Helix 36
36
B
398 401Right-handed 310
Helix 37
37
B
404 415Right-handed alpha
Helix 38
38
B
416 421Right-handed 310
Helix 39
39
B
422 427Right-handed alpha
Helix 40
40
B
427 442Right-handed alpha
Helix 41
41
B
444 451Right-handed alpha
Helix 42
42
B
456 464Right-handed alpha
Helix 43
43
B
465 469Right-handed 310
Helix 44
44
C
33 43Right-handed alpha
Helix 45
45
C
51 72Right-handed alpha
Helix 46
46
C
76 92Right-handed alpha
Helix 47
47
C
95 99Right-handed 310
Helix 48
48
C
109 128Right-handed alpha
Helix 49
49
C
149 169Right-handed alpha
Helix 50
50
C
169 188Right-handed alpha
Helix 51
51
C
207 233Right-handed alpha
Helix 52
52
C
251 265Right-handed alpha
Helix 53
53
C
273 280Right-handed alpha
Helix 54
54
C
281 309Right-handed alpha
Helix 55
55
C
337 362Right-handed alpha
Helix 56
56
C
371 397Right-handed alpha
Helix 57
57
C
398 401Right-handed 310
Helix 58
58
C
404 413Right-handed alpha
Helix 59
59
D
33 43Right-handed alpha
Helix 60
60
D
51 72Right-handed alpha
Helix 61
61
D
76 92Right-handed alpha
Helix 62
62
D
95 99Right-handed 310
Helix 63
63
D
109 128Right-handed alpha
Helix 64
64
D
149 169Right-handed alpha
Helix 65
65
D
169 189Right-handed alpha
Helix 66
66
D
207 233Right-handed alpha
Helix 67
67
D
251 265Right-handed alpha
Helix 68
68
D
273 280Right-handed alpha
Helix 69
69
D
281 309Right-handed alpha
Helix 70
70
D
337 362Right-handed alpha
Helix 71
71
D
371 397Right-handed alpha
Helix 72
72
D
398 401Right-handed 310
Helix 73
73
D
404 415Right-handed alpha
Helix 74
74
D
416 420Right-handed 310
Helix 75
75
D
430 442Right-handed alpha
Helix 76
76
D
444 450Right-handed alpha
Helix 77
77
D
456 464Right-handed alpha
Helix 78
78
D
465 469Right-handed 310
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There are 16 sheets in PDB entry 4HGV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
22 27anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
200 206anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 235first strand
Strand 2
A
269 270parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 320first strand
Strand 2
A
402 403anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 19first strand
Strand 2
B
22 27anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 197first strand
Strand 2
B
200 206anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 235first strand
Strand 2
B
269 270parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 320first strand
Strand 2
B
402 403anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 19first strand
Strand 2
C
22 27anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
192 197first strand
Strand 2
C
200 206anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
234 235first strand
Strand 2
C
269 270parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
319 320first strand
Strand 2
C
402 403anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 19first strand
Strand 2
D
22 27anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
192 197first strand
Strand 2
D
200 206anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
234 235first strand
Strand 2
D
269 270parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
319 320first strand
Strand 2
D
402 403anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il