Analysis of interatomic Contacts of Structural Units in PDB entry:
4HI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HI4 entry

There are 4 chains in PDB entry 4HI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 169THR 287
B
 GLY 169THR 287
D
 GLY 169THR 287
G
 GLY 169THR 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 4HI4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
170 180Right-handed alpha
Helix 2
2
A
199 209Right-handed alpha
Helix 3
3
A
209 217Right-handed alpha
Helix 4
4
A
221 225Right-handed 310
Helix 5
5
A
229 234Right-handed 310
Helix 6
6
A
236 247Right-handed alpha
Helix 7
7
B
170 180Right-handed alpha
Helix 8
8
B
199 209Right-handed alpha
Helix 9
9
B
209 217Right-handed alpha
Helix 10
10
B
221 225Right-handed 310
Helix 11
11
B
229 234Right-handed 310
Helix 12
12
B
236 247Right-handed alpha
Helix 13
13
D
170 180Right-handed alpha
Helix 14
14
D
199 215Right-handed alpha
Helix 15
15
D
221 225Right-handed 310
Helix 16
16
D
229 234Right-handed 310
Helix 17
17
D
236 247Right-handed alpha
Helix 18
18
G
170 180Right-handed alpha
Helix 19
19
G
199 209Right-handed alpha
Helix 20
20
G
209 215Right-handed alpha
Helix 21
21
G
221 225Right-handed 310
Helix 22
22
G
229 234Right-handed 310
Helix 23
23
G
236 247Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4HI4. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
185 190anti-parallel
Strand 3
A
276 285anti-parallel
Strand 4
A
260 270anti-parallel
Strand 5
A
251 257anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 198first strand
Strand 2
B
185 190anti-parallel
Strand 3
B
276 285anti-parallel
Strand 4
B
260 270anti-parallel
Strand 5
B
251 257anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
195 198first strand
Strand 2
D
185 190anti-parallel
Strand 3
D
276 285anti-parallel
Strand 4
D
260 270anti-parallel
Strand 5
D
251 257anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
195 198first strand
Strand 2
G
185 190anti-parallel
Strand 3
G
276 285anti-parallel
Strand 4
G
260 270anti-parallel
Strand 5
G
251 257anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il