Analysis of interatomic Contacts of Structural Units in PDB entry:
4IZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IZE entry

There are 2 chains in PDB entry 4IZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 18MET 19
A
 LYS 21ASP 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4IZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 50Right-handed 310
Helix 2
2
A
63 67Right-handed 310
Helix 3
3
A
103 110Right-handed alpha
Helix 4
4
A
114 116Right-handed 310
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There are 3 sheets in PDB entry 4IZE. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 101first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
73 80anti-parallel
Strand 4
A
118 124anti-parallel
Strand 5
A
127 132anti-parallel
Strand 6
A
163 167anti-parallel
Strand 7
A
23 29anti-parallel
Strand 8
A
55 60anti-parallel
Strand 9
A
73 80anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
41 46anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
150 152anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il