Analysis of interatomic Contacts of Structural Units in PDB entry:
4J44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J44 entry

There are 3 chains in PDB entry 4J44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 151ARG 233
B
ALA 1VAL 4
C
ALA 159ASN 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4J44. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
157 161Right-handed 310
Helix 2
2
A
162 169Right-handed alpha
Helix 3
3
A
180 187Right-handed alpha
Helix 4
4
A
215 224Right-handed alpha
Helix 5
5
A
227 233Right-handed alpha
Helix 6
6
C
162 169Right-handed alpha
Helix 7
7
C
180 187Right-handed alpha
Helix 8
8
C
215 224Right-handed alpha
Helix 9
9
C
227 234Right-handed alpha
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There are 2 sheets in PDB entry 4J44. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 191first strand
Strand 2
A
198 200anti-parallel
Strand 3
A
206 208anti-parallel
Strand 4
B
2 3anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
189 191first strand
Strand 2
C
198 200anti-parallel
Strand 3
C
206 207anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il