Analysis of interatomic Contacts of Structural Units in PDB entry:
4JG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JG7 entry

There is 1 chain in PDB entry 4JG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 405ASN 713
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4JG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
417 420Right-handed 310
Helix 2
2
A
460 471Right-handed alpha
Helix 3
3
A
500 506Right-handed alpha
Helix 4
4
A
512 533Right-handed alpha
Helix 5
5
A
541 543Right-handed 310
Helix 6
6
A
553 555Right-handed 310
Helix 7
7
A
586 613Right-handed alpha
Helix 8
8
A
625 636Right-handed alpha
Helix 9
9
A
642 646Right-handed 310
Helix 10
10
A
649 660Right-handed alpha
Helix 11
11
A
669 676Right-handed alpha
Helix 12
12
A
676 681Right-handed alpha
Helix 13
13
A
695 711Right-handed alpha
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There are 3 sheets in PDB entry 4JG7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 427first strand
Strand 2
A
436 441anti-parallel
Strand 3
A
447 454anti-parallel
Strand 4
A
488 494anti-parallel
Strand 5
A
479 484anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 536first strand
Strand 2
A
566 567anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 547first strand
Strand 2
A
557 559anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il