Analysis of interatomic Contacts of Structural Units in PDB entry:
4KGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KGO entry

There are 2 chains in PDB entry 4KGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
LEU 34LYS 255
A
SER 43ILE 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4KGO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
B
46 61Right-handed alpha
Helix 2
2
B
63 70Right-handed alpha
Helix 3
3
B
71 77Right-handed 310
Helix 4
4
B
93 97Right-handed alpha
Helix 5
5
B
184 187Right-handed 310
Helix 6
6
B
199 232Right-handed alpha
Helix 7
7
B
235 248Right-handed alpha
Helix 8
8
A
46 62Right-handed alpha
Helix 9
9
A
63 69Right-handed alpha
Helix 10
10
A
197 199Right-handed 310
Helix 11
11
A
200 212Right-handed alpha
Helix 12
12
A
214 232Right-handed alpha
Helix 13
13
A
235 248Right-handed alpha
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There are no sheets in PDB entry 4KGO

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il