Analysis of interatomic Contacts of Structural Units in PDB entry:
4KNF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KNF entry

There are 5 chains in PDB entry 4KNF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 21LEU 252
B
GLY 21HIS 255
C
GLY 21LEU 253
D
GLY 20LEU 253
E
GLY 21LEU 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 4KNF. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
27 50Right-handed alpha
Helix 2
2
A
51 54Right-handed 310
Helix 3
3
A
58 87Right-handed alpha
Helix 4
4
A
90 115Right-handed alpha
Helix 5
5
A
119 143Right-handed alpha
Helix 6
6
A
147 168Right-handed alpha
Helix 7
7
A
169 173Right-handed 310
Helix 8
8
A
179 195Right-handed alpha
Helix 9
9
A
198 209Right-handed alpha
Helix 10
10
A
216 232Right-handed alpha
Helix 11
11
A
232 251Right-handed alpha
Helix 12
12
B
27 50Right-handed alpha
Helix 13
13
B
51 54Right-handed 310
Helix 14
14
B
55 87Right-handed alpha
Helix 15
15
B
90 111Right-handed alpha
Helix 16
16
B
120 143Right-handed alpha
Helix 17
17
B
147 165Right-handed alpha
Helix 18
18
B
180 195Right-handed alpha
Helix 19
19
B
198 209Right-handed alpha
Helix 20
20
B
216 253Right-handed alpha
Helix 21
21
C
27 50Right-handed alpha
Helix 22
22
C
51 54Right-handed 310
Helix 23
23
C
58 87Right-handed alpha
Helix 24
24
C
90 117Right-handed alpha
Helix 25
25
C
119 143Right-handed alpha
Helix 26
26
C
147 168Right-handed alpha
Helix 27
27
C
169 174Right-handed 310
Helix 28
28
C
179 195Right-handed alpha
Helix 29
29
C
198 209Right-handed alpha
Helix 30
30
C
216 253Right-handed alpha
Helix 31
31
D
27 51Right-handed alpha
Helix 32
32
D
52 54Right-handed 310
Helix 33
33
D
55 87Right-handed alpha
Helix 34
34
D
90 117Right-handed alpha
Helix 35
35
D
119 143Right-handed alpha
Helix 36
36
D
147 168Right-handed alpha
Helix 37
37
D
181 195Right-handed alpha
Helix 38
38
D
198 209Right-handed alpha
Helix 39
39
D
216 251Right-handed alpha
Helix 40
40
E
27 50Right-handed alpha
Helix 41
41
E
51 54Right-handed 310
Helix 42
42
E
55 86Right-handed alpha
Helix 43
43
E
90 115Right-handed alpha
Helix 44
44
E
119 143Right-handed alpha
Helix 45
45
E
147 168Right-handed alpha
Helix 46
46
E
169 174Right-handed 310
Helix 47
47
E
179 196Right-handed alpha
Helix 48
48
E
198 209Right-handed alpha
Helix 49
49
E
216 252Right-handed alpha
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There are no sheets in PDB entry 4KNF

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