Analysis of interatomic Contacts of Structural Units in PDB entry:
4MNE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MNE entry

There are 8 chains in PDB entry 4MNE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 63ILE 379
B
ASP 449PRO 722
C
ASP 449SER 720
D
ASP 66ASN 382
E
GLU 62ILE 379
F
ASP 449LEU 721
G
ASP 449SER 720
H
ASP 66GLY 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are110 helices in PDB entry 4MNE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
64 66Right-handed 310
Helix 2
2
A
104 116Right-handed alpha
Helix 3
3
A
117 121Right-handed 310
Helix 4
4
A
151 159Right-handed alpha
Helix 5
5
A
162 185Right-handed alpha
Helix 6
6
A
192 194Right-handed 310
Helix 7
7
A
212 219Right-handed alpha
Helix 8
8
A
231 236Right-handed alpha
Helix 9
9
A
241 259Right-handed alpha
Helix 10
10
A
267 274Right-handed alpha
Helix 11
11
A
309 320Right-handed alpha
Helix 12
12
A
331 342Right-handed alpha
Helix 13
13
A
345 349Right-handed 310
Helix 14
14
A
351 357Right-handed alpha
Helix 15
15
A
358 367Right-handed alpha
Helix 16
16
A
370 378Right-handed alpha
Helix 17
17
B
491 506Right-handed alpha
Helix 18
18
B
536 543Right-handed alpha
Helix 19
19
B
549 570Right-handed alpha
Helix 20
20
B
578 580Right-handed 310
Helix 21
21
B
586 588Right-handed 310
Helix 22
22
B
616 620Right-handed 310
Helix 23
23
B
621 627Right-handed alpha
Helix 24
24
B
634 652Right-handed alpha
Helix 25
25
B
661 671Right-handed alpha
Helix 26
26
B
677 681Right-handed 310
Helix 27
27
B
686 697Right-handed alpha
Helix 28
28
B
700 704Right-handed 310
Helix 29
29
B
706 719Right-handed alpha
Helix 30
30
C
491 506Right-handed alpha
Helix 31
31
C
537 543Right-handed alpha
Helix 32
32
C
549 570Right-handed alpha
Helix 33
33
C
578 580Right-handed 310
Helix 34
34
C
616 620Right-handed 310
Helix 35
35
C
621 627Right-handed alpha
Helix 36
36
C
634 652Right-handed alpha
Helix 37
37
C
661 671Right-handed alpha
Helix 38
38
C
677 681Right-handed 310
Helix 39
39
C
686 697Right-handed alpha
Helix 40
40
C
700 704Right-handed 310
Helix 41
41
C
706 719Right-handed alpha
Helix 42
42
D
104 116Right-handed alpha
Helix 43
43
D
117 121Right-handed 310
Helix 44
44
D
150 159Right-handed alpha
Helix 45
45
D
162 185Right-handed alpha
Helix 46
46
D
192 194Right-handed 310
Helix 47
47
D
212 219Right-handed alpha
Helix 48
48
D
231 236Right-handed alpha
Helix 49
49
D
241 259Right-handed alpha
Helix 50
50
D
267 273Right-handed alpha
Helix 51
51
D
309 320Right-handed alpha
Helix 52
52
D
331 342Right-handed alpha
Helix 53
53
D
351 357Right-handed alpha
Helix 54
54
D
358 367Right-handed alpha
Helix 55
55
D
370 379Right-handed alpha
Helix 56
56
E
64 66Right-handed 310
Helix 57
57
E
104 116Right-handed alpha
Helix 58
58
E
117 119Right-handed 310
Helix 59
59
E
151 159Right-handed alpha
Helix 60
60
E
162 185Right-handed alpha
Helix 61
61
E
192 194Right-handed 310
Helix 62
62
E
212 219Right-handed alpha
Helix 63
63
E
231 236Right-handed alpha
Helix 64
64
E
242 259Right-handed alpha
Helix 65
65
E
267 273Right-handed alpha
Helix 66
66
E
309 320Right-handed alpha
Helix 67
67
E
331 343Right-handed alpha
Helix 68
68
E
351 357Right-handed alpha
Helix 69
69
E
358 367Right-handed alpha
Helix 70
70
E
370 378Right-handed alpha
Helix 71
71
F
491 506Right-handed alpha
Helix 72
72
F
536 543Right-handed alpha
Helix 73
73
F
549 570Right-handed alpha
Helix 74
74
F
578 580Right-handed 310
Helix 75
75
F
586 588Right-handed 310
Helix 76
76
F
616 620Right-handed 310
Helix 77
77
F
621 627Right-handed alpha
Helix 78
78
F
634 652Right-handed alpha
Helix 79
79
F
661 671Right-handed alpha
Helix 80
80
F
677 681Right-handed 310
Helix 81
81
F
686 697Right-handed alpha
Helix 82
82
F
700 704Right-handed 310
Helix 83
83
F
706 719Right-handed alpha
Helix 84
84
G
491 507Right-handed alpha
Helix 85
85
G
536 543Right-handed alpha
Helix 86
86
G
549 570Right-handed alpha
Helix 87
87
G
578 580Right-handed 310
Helix 88
88
G
586 588Right-handed 310
Helix 89
89
G
616 620Right-handed 310
Helix 90
90
G
621 627Right-handed alpha
Helix 91
91
G
634 652Right-handed alpha
Helix 92
92
G
661 671Right-handed alpha
Helix 93
93
G
677 681Right-handed 310
Helix 94
94
G
686 697Right-handed alpha
Helix 95
95
G
700 704Right-handed 310
Helix 96
96
G
706 719Right-handed alpha
Helix 97
97
H
104 116Right-handed alpha
Helix 98
98
H
117 121Right-handed 310
Helix 99
99
H
151 158Right-handed alpha
Helix 100
100
H
162 185Right-handed alpha
Helix 101
101
H
192 194Right-handed 310
Helix 102
102
H
212 220Right-handed alpha
Helix 103
103
H
231 236Right-handed alpha
Helix 104
104
H
242 259Right-handed alpha
Helix 105
105
H
309 320Right-handed alpha
Helix 106
106
H
331 342Right-handed alpha
Helix 107
107
H
345 349Right-handed 310
Helix 108
108
H
351 358Right-handed alpha
Helix 109
109
H
358 366Right-handed alpha
Helix 110
110
H
370 379Right-handed alpha
Back to top of page

There are 20 sheets in PDB entry 4MNE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
68 76first strand
Strand 2
A
80 87anti-parallel
Strand 3
A
93 100anti-parallel
Strand 4
A
138 144anti-parallel
Strand 5
A
129 135anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
149 150first strand
Strand 2
A
196 198anti-parallel
Strand 3
A
204 206anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
462 464first strand
Strand 2
B
470 475anti-parallel
Strand 3
B
479 484anti-parallel
Strand 4
B
526 530anti-parallel
Strand 5
B
516 520anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
572 573first strand
Strand 2
B
599 600anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
582 585first strand
Strand 2
B
589 592anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
458 462first strand
Strand 2
C
471 475anti-parallel
Strand 3
C
479 485anti-parallel
Strand 4
C
525 530anti-parallel
Strand 5
C
516 520anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
534 536first strand
Strand 2
C
582 585anti-parallel
Strand 3
C
589 592anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
572 573first strand
Strand 2
C
599 600anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
68 77first strand
Strand 2
D
80 87anti-parallel
Strand 3
D
92 100anti-parallel
Strand 4
D
138 143anti-parallel
Strand 5
D
129 134anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
196 198first strand
Strand 2
D
204 206anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
68 76first strand
Strand 2
E
80 87anti-parallel
Strand 3
E
93 100anti-parallel
Strand 4
E
138 143anti-parallel
Strand 5
E
129 134anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
149 150first strand
Strand 2
E
196 198anti-parallel
Strand 3
E
204 206anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
458 462first strand
Strand 2
F
471 475anti-parallel
Strand 3
F
479 484anti-parallel
Strand 4
F
526 530anti-parallel
Strand 5
F
516 520anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
572 573first strand
Strand 2
F
599 600anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
582 585first strand
Strand 2
F
589 592anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
458 462first strand
Strand 2
G
471 475anti-parallel
Strand 3
G
479 484anti-parallel
Strand 4
G
526 530anti-parallel
Strand 5
G
516 520anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
572 573first strand
Strand 2
G
599 600anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
582 585first strand
Strand 2
G
589 592anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
68 76first strand
Strand 2
H
80 87anti-parallel
Strand 3
H
93 100anti-parallel
Strand 4
H
138 143anti-parallel
Strand 5
H
129 134anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
149 150first strand
Strand 2
H
196 198anti-parallel
Strand 3
H
204 206anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il