Analysis of interatomic Contacts of Structural Units in PDB entry:
4MVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MVL entry

There are 8 chains in PDB entry 4MVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ASP 177
B
 ASP 6ASP 177
C
 SER 5GLY 178
D
 LEU 7ASP 177
E
 LEU 17ASN 27
F
 LEU 17ASN 27
G
 VAL 18SER 26
H
 VAL 18SER 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4MVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
23 28Right-handed alpha
Helix 3
3
A
145 159Right-handed alpha
Helix 4
4
A
162 164Right-handed 310
Helix 5
5
B
23 28Right-handed alpha
Helix 6
6
B
145 158Right-handed alpha
Helix 7
7
B
162 164Right-handed 310
Helix 8
8
C
23 28Right-handed alpha
Helix 9
9
C
145 159Right-handed alpha
Helix 10
10
C
162 164Right-handed 310
Helix 11
11
D
23 28Right-handed alpha
Helix 12
12
D
145 159Right-handed alpha
Helix 13
13
D
162 164Right-handed 310
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There are 4 sheets in PDB entry 4MVL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
29 38anti-parallel
Strand 3
A
133 139anti-parallel
Strand 4
A
118 126anti-parallel
Strand 5
A
105 113anti-parallel
Strand 6
A
91 94anti-parallel
Strand 7
A
75 85anti-parallel
Strand 8
A
64 72anti-parallel
Strand 9
A
52 58anti-parallel
Strand 10
A
29 38anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 167first strand
Strand 2
B
29 38anti-parallel
Strand 3
B
133 139anti-parallel
Strand 4
B
118 126anti-parallel
Strand 5
B
105 113anti-parallel
Strand 6
B
91 93anti-parallel
Strand 7
B
75 85anti-parallel
Strand 8
B
64 72anti-parallel
Strand 9
B
53 58anti-parallel
Strand 10
B
29 38anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
166 167first strand
Strand 2
C
29 38anti-parallel
Strand 3
C
133 139anti-parallel
Strand 4
C
118 124anti-parallel
Strand 5
C
107 113anti-parallel
Strand 6
C
91 94anti-parallel
Strand 7
C
75 85anti-parallel
Strand 8
C
64 72anti-parallel
Strand 9
C
53 58anti-parallel
Strand 10
C
29 38anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
166 167first strand
Strand 2
D
29 38anti-parallel
Strand 3
D
133 139anti-parallel
Strand 4
D
118 126anti-parallel
Strand 5
D
105 113anti-parallel
Strand 6
D
91 94anti-parallel
Strand 7
D
76 85anti-parallel
Strand 8
D
64 71anti-parallel
Strand 9
D
52 58anti-parallel
Strand 10
D
29 38anti-parallel
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