Analysis of interatomic Contacts of Structural Units in PDB entry:
4N06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N06 entry

There are 2 chains in PDB entry 4N06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1LYS 344
B
 GLY -1TRP 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4N06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 34Right-handed 310
Helix 2
2
A
49 58Right-handed alpha
Helix 3
3
A
82 93Right-handed alpha
Helix 4
4
A
95 124Right-handed alpha
Helix 5
5
A
128 151Right-handed alpha
Helix 6
6
A
156 183Right-handed alpha
Helix 7
7
A
184 188Right-handed 310
Helix 8
8
A
205 229Right-handed alpha
Helix 9
9
A
246 254Right-handed alpha
Helix 10
10
A
256 271Right-handed alpha
Helix 11
11
A
275 277Right-handed 310
Helix 12
12
A
289 306Right-handed alpha
Helix 13
13
A
317 333Right-handed alpha
Helix 14
14
B
32 34Right-handed 310
Helix 15
15
B
49 58Right-handed alpha
Helix 16
16
B
82 93Right-handed alpha
Helix 17
17
B
95 124Right-handed alpha
Helix 18
18
B
128 152Right-handed alpha
Helix 19
19
B
156 183Right-handed alpha
Helix 20
20
B
184 188Right-handed 310
Helix 21
21
B
205 229Right-handed alpha
Helix 22
22
B
246 254Right-handed alpha
Helix 23
23
B
256 261Right-handed alpha
Helix 24
24
B
261 271Right-handed alpha
Helix 25
25
B
275 277Right-handed 310
Helix 26
26
B
289 305Right-handed alpha
Helix 27
27
B
317 333Right-handed alpha
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There are 7 sheets in PDB entry 4N06. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 6first strand
Strand 2
A
36 42parallel
Strand 3
A
61 65parallel
Strand 4
A
71 75anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 31first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
10 15anti-parallel
Strand 4
A
46 48parallel
Strand 5
B
46 48anti-parallel
Strand 6
B
10 15parallel
Strand 7
B
18 23anti-parallel
Strand 8
B
26 31anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 282first strand
Strand 2
A
285 288anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 310first strand
Strand 2
A
313 316anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 6first strand
Strand 2
B
36 42parallel
Strand 3
B
61 65parallel
Strand 4
B
71 75anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 282first strand
Strand 2
B
285 288anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 310first strand
Strand 2
B
313 316anti-parallel
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