Analysis of interatomic Contacts of Structural Units in PDB entry:
4O02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O02 entry

There are 2 chains in PDB entry 4O02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1TRP 953
B
 GLY 1ILE 639
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4O02. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
175 180Right-handed alpha
Helix 2
2
A
187 195Right-handed alpha
Helix 3
3
A
214 218Right-handed 310
Helix 4
4
A
245 250Right-handed alpha
Helix 5
5
A
366 370Right-handed 310
Helix 6
6
A
427 429Right-handed 310
Helix 7
7
A
768 773Right-handed alpha
Helix 8
8
B
12 20Right-handed alpha
Helix 9
9
B
42 47Right-handed alpha
Helix 10
10
B
121 125Right-handed 310
Helix 11
11
B
126 132Right-handed alpha
Helix 12
12
B
133 143Right-handed alpha
Helix 13
13
B
170 174Right-handed 310
Helix 14
14
B
200 208Right-handed alpha
Helix 15
15
B
221 232Right-handed alpha
Helix 16
16
B
258 262Right-handed 310
Helix 17
17
B
291 302Right-handed alpha
Helix 18
18
B
314 325Right-handed alpha
Helix 19
19
B
339 352Right-handed alpha
Helix 20
20
B
574 577Right-handed 310
Helix 21
21
B
607 621Right-handed alpha
Helix 22
22
L
79 83Right-handed 310
Helix 23
23
L
182 189Right-handed alpha
Helix 24
24
H
28 32Right-handed 310
Helix 25
25
H
87 91Right-handed 310
Helix 26
26
H
161 163Right-handed 310
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There are 35 sheets in PDB entry 4O02. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
431 435anti-parallel
Strand 3
A
422 426anti-parallel
Strand 4
A
407 409anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
35 40anti-parallel
Strand 3
A
55 60anti-parallel
Strand 4
A
67 69anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
84 85anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
113 115anti-parallel
Strand 3
A
122 123anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
104 109anti-parallel
Strand 3
A
127 131anti-parallel
Strand 4
A
136 139anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 163first strand
Strand 2
A
169 173anti-parallel
Strand 3
A
182 186anti-parallel
Strand 4
A
208 209anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 229first strand
Strand 2
A
238 243anti-parallel
Strand 3
A
252 256anti-parallel
Strand 4
A
263 268anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 283first strand
Strand 2
A
292 297anti-parallel
Strand 3
A
314 319anti-parallel
Strand 4
A
327 332anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
310 311anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 348first strand
Strand 2
A
357 362anti-parallel
Strand 3
A
372 376anti-parallel
Strand 4
A
389 392anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 513first strand
Strand 2
A
534 542anti-parallel
Strand 3
A
472 482anti-parallel
Strand 4
A
440 449anti-parallel
Strand 5
A
577 578parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 527first strand
Strand 2
A
491 498anti-parallel
Strand 3
A
557 563anti-parallel
Strand 4
A
585 588anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 611first strand
Strand 2
A
623 633anti-parallel
Strand 3
A
692 701anti-parallel
Strand 4
A
652 656anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 682first strand
Strand 2
A
642 646anti-parallel
Strand 3
A
713 718anti-parallel
Strand 4
A
730 732anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
741 748first strand
Strand 2
A
775 785anti-parallel
Strand 3
A
893 903anti-parallel
Strand 4
A
809 814anti-parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 753first strand
Strand 2
A
942 951parallel
Strand 3
A
918 929anti-parallel
Strand 4
A
792 798anti-parallel
Strand 5
A
882 886anti-parallel
Strand 6
A
820 823anti-parallel
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There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 65first strand
Strand 2
B
87 92anti-parallel
Strand 3
B
425 431parallel
Strand 4
B
412 418anti-parallel
Strand 5
B
354 360anti-parallel
Strand 6
B
385 387anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 105first strand
Strand 2
B
394 403anti-parallel
Strand 3
B
366 375anti-parallel
Strand 4
B
378 381anti-parallel
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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 197first strand
Strand 2
B
149 156anti-parallel
Strand 3
B
112 119parallel
Strand 4
B
243 250parallel
Strand 5
B
305 310parallel
Strand 6
B
329 332parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
500 502first strand
Strand 2
B
505 507anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
540 543first strand
Strand 2
B
546 549anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
553 554first strand
Strand 2
B
560 561anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
579 581first strand
Strand 2
B
586 588anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
653 656first strand
Strand 2
B
666 669anti-parallel
Strand 3
B
679 681anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 5first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 66anti-parallel
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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
33 39anti-parallel
Strand 5
L
42 48anti-parallel
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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
97 98anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 116first strand
Strand 2
L
133 139anti-parallel
Strand 3
L
173 179anti-parallel
Strand 4
L
159 164anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
153 154first strand
Strand 2
L
145 150anti-parallel
Strand 3
L
191 197anti-parallel
Strand 4
L
205 210anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
78 84anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 11first strand
Strand 2
H
112 115parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 11first strand
Strand 2
H
112 115parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
105 108anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 129first strand
Strand 2
H
140 150anti-parallel
Strand 3
H
184 189anti-parallel
Strand 4
H
168 170anti-parallel
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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 129first strand
Strand 2
H
140 150anti-parallel
Strand 3
H
180 182anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
156 159first strand
Strand 2
H
199 203anti-parallel
Strand 3
H
210 214anti-parallel
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