Analysis of interatomic Contacts of Structural Units in PDB entry:
4O4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O4V entry

There is 1 chain in PDB entry 4O4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2LYS 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4O4V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 29Right-handed alpha
Helix 2
2
A
43 45Right-handed 310
Helix 3
3
A
46 54Right-handed alpha
Helix 4
4
A
78 84Right-handed alpha
Helix 5
5
A
94 100Right-handed alpha
Helix 6
6
A
104 118Right-handed alpha
Helix 7
7
A
129 135Right-handed alpha
Helix 8
8
A
137 150Right-handed alpha
Helix 9
9
A
151 153Right-handed 310
Helix 10
10
A
157 159Right-handed 310
Helix 11
11
A
167 171Right-handed 310
Helix 12
12
A
178 198Right-handed alpha
Helix 13
13
A
198 205Right-handed alpha
Helix 14
14
A
217 223Right-handed alpha
Helix 15
15
A
233 238Right-handed 310
Helix 16
16
A
239 247Right-handed alpha
Helix 17
17
A
248 251Right-handed 310
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There is 1 sheet ( A) in PDB entry 4O4V.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
37 41parallel
Strand 3
A
59 62parallel
Strand 4
A
89 92parallel
Strand 5
A
121 126parallel
Strand 6
A
161 165parallel
Strand 7
A
207 209parallel
Strand 8
A
229 232parallel
Strand 9
A
5 9parallel
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