Analysis of interatomic Contacts of Structural Units in PDB entry:
4O7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O7X entry

There is 1 chain in PDB entry 4O7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 74LEU 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4O7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 87Right-handed alpha
Helix 2
2
A
96 116Right-handed alpha
Helix 3
3
A
120 122Right-handed 310
Helix 4
4
A
165 172Right-handed alpha
Helix 5
5
A
172 179Right-handed alpha
Helix 6
6
A
230 234Right-handed 310
Helix 7
7
A
257 263Right-handed alpha
Helix 8
8
A
269 273Right-handed 310
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There are 2 sheets in PDB entry 4O7X. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
252 256anti-parallel
Strand 3
A
215 219anti-parallel
Strand 4
A
277 283anti-parallel
Strand 5
A
189 195anti-parallel
Strand 6
A
130 135anti-parallel
Strand 7
A
124 127anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
266 268anti-parallel
Strand 3
A
224 228anti-parallel
Strand 4
A
244 248anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il