Analysis of interatomic Contacts of Structural Units in PDB entry:
4OG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OG6 entry

There is 1 chain in PDB entry 4OG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 2LYS 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4OG6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 9Right-handed alpha
Helix 2
2
A
15 28Right-handed alpha
Helix 3
3
A
33 50Right-handed alpha
Helix 4
4
A
82 101Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
108 112Right-handed 310
Helix 7
7
A
114 129Right-handed alpha
Helix 8
8
A
142 150Right-handed alpha
Helix 9
9
A
153 168Right-handed alpha
Helix 10
10
A
187 191Right-handed 310
Helix 11
11
A
211 217Right-handed alpha
Helix 12
12
A
219 226Right-handed 310
Helix 13
13
A
231 242Right-handed alpha
Helix 14
14
A
253 271Right-handed alpha
Helix 15
15
A
276 290Right-handed alpha
Helix 16
16
A
297 313Right-handed alpha
Helix 17
17
A
318 331Right-handed alpha
Helix 18
18
A
333 349Right-handed alpha
Helix 19
19
A
357 370Right-handed alpha
Helix 20
20
A
370 385Right-handed alpha
Helix 21
21
A
402 405Right-handed 310
Helix 22
22
A
406 425Right-handed alpha
Helix 23
23
A
433 446Right-handed alpha
Helix 24
24
A
448 453Right-handed alpha
Helix 25
25
A
555 562Right-handed alpha
Helix 26
26
A
563 565Right-handed 310
Helix 27
27
A
571 581Right-handed alpha
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There are 3 sheets in PDB entry 4OG6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
192 194first strand
Strand 2
A
182 186anti-parallel
Strand 3
A
174 177anti-parallel
Strand 4
A
228 229anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
246 248first strand
Strand 2
A
251 252anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
456 458first strand
Strand 2
A
550 552parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il