Analysis of interatomic Contacts of Structural Units in PDB entry:
4OI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OI9 entry

There is 1 chain in PDB entry 4OI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 1ARG 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4OI9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
118 120Right-handed 310
Helix 2
2
A
157 161Right-handed 310
Helix 3
3
A
174 177Right-handed 310
Helix 4
4
A
225 229Right-handed 310
Helix 5
5
A
342 346Right-handed 310
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There are 10 sheets in PDB entry 4OI9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 8first strand
Strand 2
A
18 26anti-parallel
Strand 3
A
51 59anti-parallel
Strand 4
A
41 47anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
11 15first strand
Strand 2
A
82 86parallel
Strand 3
A
63 64anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 37first strand
Strand 2
A
67 72anti-parallel
Strand 3
A
75 80anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
93 94first strand
Strand 2
A
106 113anti-parallel
Strand 3
A
148 155anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
101 102first strand
Strand 2
A
192 195parallel
Strand 3
A
223 224anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
131 137first strand
Strand 2
A
122 128anti-parallel
Strand 3
A
165 172anti-parallel
Strand 4
A
180 184anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
201 203first strand
Strand 2
A
214 220anti-parallel
Strand 3
A
250 257anti-parallel
Strand 4
A
243 247anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
207 209first strand
Strand 2
A
278 289parallel
Strand 3
A
265 275anti-parallel
Strand 4
A
230 235anti-parallel
Strand 5
A
239 240anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
295 298first strand
Strand 2
A
308 314anti-parallel
Strand 3
A
335 340anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
302 304first strand
Strand 2
A
361 374parallel
Strand 3
A
348 358anti-parallel
Strand 4
A
320 323anti-parallel
Strand 5
A
326 327anti-parallel
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