Analysis of interatomic Contacts of Structural Units in PDB entry:
4OIQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OIQ entry

There are 8 chains in PDB entry 4OIQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 4ALA 234
B
ALA 8PRO 228
C
MET 1LYS 1118
D
LYS 3ALA 1502
E
ALA 2VAL 95
F
SER 78ASP 423
G
G 4 G 19
H
T 1 C 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are125 helices in PDB entry 4OIQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
31 47Right-handed alpha
Helix 2
2
A
74 83Right-handed alpha
Helix 3
3
A
112 114Right-handed 310
Helix 4
4
A
152 157Right-handed alpha
Helix 5
5
A
206 224Right-handed alpha
Helix 6
6
B
31 47Right-handed alpha
Helix 7
7
B
74 84Right-handed alpha
Helix 8
8
B
152 157Right-handed alpha
Helix 9
9
B
206 223Right-handed alpha
Helix 10
10
B
224 226Right-handed 310
Helix 11
11
C
19 31Right-handed alpha
Helix 12
12
C
35 39Right-handed 310
Helix 13
13
C
42 52Right-handed alpha
Helix 14
14
C
79 87Right-handed alpha
Helix 15
15
C
193 200Right-handed alpha
Helix 16
16
C
203 212Right-handed alpha
Helix 17
17
C
216 222Right-handed 310
Helix 18
18
C
223 228Right-handed alpha
Helix 19
19
C
229 243Right-handed alpha
Helix 20
20
C
249 262Right-handed alpha
Helix 21
21
C
270 282Right-handed alpha
Helix 22
22
C
302 316Right-handed alpha
Helix 23
23
C
335 361Right-handed alpha
Helix 24
24
C
368 373Right-handed alpha
Helix 25
25
C
375 389Right-handed alpha
Helix 26
26
C
399 408Right-handed alpha
Helix 27
27
C
424 429Right-handed alpha
Helix 28
28
C
431 435Right-handed 310
Helix 29
29
C
487 492Right-handed alpha
Helix 30
30
C
525 529Right-handed 310
Helix 31
31
C
535 540Right-handed 310
Helix 32
32
C
543 547Right-handed 310
Helix 33
33
C
549 553Right-handed 310
Helix 34
34
C
554 566Right-handed alpha
Helix 35
35
C
583 591Right-handed alpha
Helix 36
36
C
683 687Right-handed 310
Helix 37
37
C
692 697Right-handed alpha
Helix 38
38
C
730 735Right-handed alpha
Helix 39
39
C
768 779Right-handed alpha
Helix 40
40
C
854 858Right-handed 310
Helix 41
41
C
872 876Right-handed 310
Helix 42
42
C
882 898Right-handed alpha
Helix 43
43
C
910 932Right-handed alpha
Helix 44
44
C
937 950Right-handed alpha
Helix 45
45
C
958 969Right-handed alpha
Helix 46
46
C
1000 1004Right-handed 310
Helix 47
47
C
1033 1044Right-handed alpha
Helix 48
48
C
1045 1054Right-handed alpha
Helix 49
49
C
1059 1073Right-handed alpha
Helix 50
50
C
1082 1094Right-handed alpha
Helix 51
51
D
14 22Right-handed alpha
Helix 52
52
D
46 51Right-handed alpha
Helix 53
53
D
82 88Right-handed 310
Helix 54
54
D
102 107Right-handed alpha
Helix 55
55
D
110 116Right-handed alpha
Helix 56
56
D
119 128Right-handed alpha
Helix 57
57
D
154 164Right-handed alpha
Helix 58
58
D
372 376Right-handed 310
Helix 59
59
D
423 426Right-handed 310
Helix 60
60
D
457 467Right-handed alpha
Helix 61
61
D
469 481Right-handed alpha
Helix 62
62
D
485 506Right-handed alpha
Helix 63
63
D
508 511Right-handed 310
Helix 64
64
D
521 525Right-handed 310
Helix 65
65
D
538 560Right-handed alpha
Helix 66
66
D
563 584Right-handed alpha
Helix 67
67
D
602 608Right-handed alpha
Helix 68
68
D
612 618Right-handed alpha
Helix 69
69
D
646 663Right-handed alpha
Helix 70
70
D
669 679Right-handed alpha
Helix 71
71
D
685 695Right-handed alpha
Helix 72
72
D
709 711Right-handed 310
Helix 73
73
D
732 737Right-handed alpha
Helix 74
74
D
752 763Right-handed alpha
Helix 75
75
D
783 794Right-handed alpha
Helix 76
76
D
808 818Right-handed alpha
Helix 77
77
D
836 841Right-handed alpha
Helix 78
78
D
845 855Right-handed alpha
Helix 79
79
D
876 891Right-handed alpha
Helix 80
80
D
892 900Right-handed alpha
Helix 81
81
D
907 946Right-handed alpha
Helix 82
82
D
950 954Right-handed 310
Helix 83
83
D
958 980Right-handed alpha
Helix 84
84
D
984 1015Right-handed alpha
Helix 85
85
D
1018 1026Right-handed alpha
Helix 86
86
D
1031 1040Right-handed alpha
Helix 87
87
D
1066 1103Right-handed alpha
Helix 88
88
D
1136 1145Right-handed alpha
Helix 89
89
D
1167 1180Right-handed alpha
Helix 90
90
D
1202 1206Right-handed alpha
Helix 91
91
D
1220 1231Right-handed alpha
Helix 92
92
D
1232 1236Right-handed 310
Helix 93
93
D
1254 1264Right-handed alpha
Helix 94
94
D
1331 1339Right-handed alpha
Helix 95
95
D
1340 1359Right-handed alpha
Helix 96
96
D
1364 1376Right-handed alpha
Helix 97
97
D
1397 1409Right-handed alpha
Helix 98
98
D
1423 1430Right-handed alpha
Helix 99
99
D
1433 1439Right-handed alpha
Helix 100
100
D
1442 1454Right-handed alpha
Helix 101
101
D
1461 1469Right-handed alpha
Helix 102
102
D
1474 1478Right-handed 310
Helix 103
103
D
1489 1502Right-handed alpha
Helix 104
104
E
5 12Right-handed alpha
Helix 105
105
E
15 34Right-handed alpha
Helix 106
106
E
41 45Right-handed 310
Helix 107
107
E
59 71Right-handed alpha
Helix 108
108
E
81 93Right-handed alpha
Helix 109
109
F
79 90Right-handed alpha
Helix 110
110
F
95 121Right-handed alpha
Helix 111
111
F
123 137Right-handed alpha
Helix 112
112
F
152 165Right-handed alpha
Helix 113
113
F
167 200Right-handed alpha
Helix 114
114
F
208 226Right-handed alpha
Helix 115
115
F
227 232Right-handed 310
Helix 116
116
F
234 255Right-handed alpha
Helix 117
117
F
261 283Right-handed alpha
Helix 118
118
F
287 296Right-handed alpha
Helix 119
119
F
300 311Right-handed alpha
Helix 120
120
F
328 333Right-handed 310
Helix 121
121
F
340 358Right-handed alpha
Helix 122
122
F
362 372Right-handed alpha
Helix 123
123
F
382 391Right-handed alpha
Helix 124
124
F
393 416Right-handed alpha
Helix 125
125
F
419 423Right-handed 310
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There are 54 sheets in PDB entry 4OIQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 16first strand
Strand 2
A
20 28anti-parallel
Strand 3
A
189 201anti-parallel
Strand 4
A
174 186anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 104first strand
Strand 2
A
137 147anti-parallel
Strand 3
A
50 58anti-parallel
Strand 4
A
165 166anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 89first strand
Strand 2
A
120 122anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
107 110first strand
Strand 2
A
128 132anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
150 151first strand
Strand 2
A
169 170anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 16first strand
Strand 2
B
20 28anti-parallel
Strand 3
B
193 201anti-parallel
Strand 4
B
174 183anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 104first strand
Strand 2
B
137 148anti-parallel
Strand 3
B
49 58anti-parallel
Strand 4
B
165 166anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
87 89first strand
Strand 2
B
120 122anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 110first strand
Strand 2
B
128 132anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
150 151first strand
Strand 2
B
169 170anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 5first strand
Strand 2
C
900 902parallel
Strand 3
C
579 580parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
54 55first strand
Strand 2
C
64 73anti-parallel
Strand 3
C
91 102anti-parallel
Strand 4
C
108 119anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
127 129first strand
Strand 2
C
132 136anti-parallel
Strand 3
C
392 394anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
331 334first strand
Strand 2
C
138 142anti-parallel
Strand 3
C
409 411parallel
Strand 4
C
452 454anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
145 150first strand
Strand 2
C
158 163anti-parallel
Strand 3
C
172 176anti-parallel
Strand 4
C
182 186anti-parallel
Strand 5
C
189 192anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
291 294first strand
Strand 2
C
297 300anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
460 461first strand
Strand 2
C
467 475anti-parallel
Strand 3
C
478 486anti-parallel
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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
460 461first strand
Strand 2
C
467 475anti-parallel
Strand 3
C
531 533anti-parallel
Strand 4
C
496 497parallel
Strand 5
C
513 517anti-parallel
Strand 6
C
520 524anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
503 504first strand
Strand 2
C
507 508anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
595 596first strand
Strand 2
C
654 657anti-parallel
Strand 3
C
640 641anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
620 624first strand
Strand 2
C
610 615anti-parallel
Strand 3
C
601 606anti-parallel
Strand 4
C
648 649anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
629 630first strand
Strand 2
C
636 637anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
661 662first strand
Strand 2
C
665 666anti-parallel
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There are 8 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
971 972first strand
Strand 2
C
987 996anti-parallel
Strand 3
C
838 841anti-parallel
Strand 4
C
846 853anti-parallel
Strand 5
C
688 691parallel
Strand 6
C
869 871anti-parallel
Strand 7
C
670 676parallel
Strand 8
C
987 996anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
702 713first strand
Strand 2
C
819 831anti-parallel
Strand 3
C
798 807anti-parallel
Strand 4
C
748 749anti-parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
721 722first strand
Strand 2
C
758 761anti-parallel
Strand 3
C
785 787anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
754 756first strand
Strand 2
C
790 791anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1006 1008first strand
Strand 2
D
626 633anti-parallel
Strand 3
D
744 748anti-parallel
Strand 4
D
700 703anti-parallel
Strand 5
D
713 721anti-parallel
Strand 6
D
641 645parallel
Strand 7
D
726 728anti-parallel
Strand 8
D
626 633parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1030 1031first strand
Strand 2
D
622 623anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1097 1102first strand
Strand 2
D
7 12anti-parallel
Strand 3
D
1456 1457anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
91 100first strand
Strand 2
D
513 519anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
152 153first strand
Strand 2
D
132 136anti-parallel
Strand 3
D
453 455anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
141 142first strand
Strand 2
D
145 146anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
166 170first strand
Strand 2
D
383 396anti-parallel
Strand 3
D
201 226anti-parallel
Strand 4
D
184 185anti-parallel
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There are 5 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
166 170first strand
Strand 2
D
383 396anti-parallel
Strand 3
D
201 226anti-parallel
Strand 4
D
330 346anti-parallel
Strand 5
D
317 327anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
190 192first strand
Strand 2
D
195 196anti-parallel
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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
241 244first strand
Strand 2
D
303 312anti-parallel
Strand 3
D
249 252anti-parallel
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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
241 244first strand
Strand 2
D
303 312anti-parallel
Strand 3
D
286 290anti-parallel
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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
277 284first strand
Strand 2
D
268 274anti-parallel
Strand 3
D
257 263anti-parallel
Strand 4
D
297 298anti-parallel
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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
352 353first strand
Strand 2
D
366 369anti-parallel
Strand 3
D
377 378anti-parallel
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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
398 402first strand
Strand 2
D
443 448anti-parallel
Strand 3
D
433 438anti-parallel
Strand 4
D
414 415anti-parallel
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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
420 422first strand
Strand 2
D
427 428anti-parallel
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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
527 529first strand
Strand 2
D
535 537anti-parallel
Strand 3
F
315 316parallel
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There are 3 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
805 806first strand
Strand 2
D
826 829parallel
Strand 3
D
834 835anti-parallel
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There are 3 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
842 843first strand
Strand 2
D
864 868parallel
Strand 3
D
871 875anti-parallel
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There are 2 strands in AT sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1106 1109first strand
Strand 2
D
1199 1201parallel
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There are 3 strands in AU sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1118 1121first strand
Strand 2
D
1185 1189anti-parallel
Strand 3
D
1148 1149anti-parallel
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There are 2 strands in AV sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1123 1125first strand
Strand 2
D
1132 1134anti-parallel
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There are 2 strands in AW sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1153 1155first strand
Strand 2
D
1158 1160anti-parallel
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There are 2 strands in AX sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1271 1272first strand
Strand 2
D
1329 1330parallel
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There are 4 strands in AY sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1300 1305first strand
Strand 2
D
1290 1295anti-parallel
Strand 3
D
1279 1285anti-parallel
Strand 4
D
1318 1319anti-parallel
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There are 3 strands in AZ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1394 1396first strand
Strand 2
D
1378 1383anti-parallel
Strand 3
D
1416 1420anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1485 1488first strand
Strand 2
E
73 76anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
47 49first strand
Strand 2
E
54 56anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il