Analysis of interatomic Contacts of Structural Units in PDB entry:
4OLM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OLM entry

There are 2 chains in PDB entry 4OLM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 671THR 918
B
 ASP 1TYR 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4OLM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
671 681Right-handed alpha
Helix 2
2
A
696 721Right-handed alpha
Helix 3
3
A
724 728Right-handed 310
Helix 4
4
A
729 758Right-handed alpha
Helix 5
5
A
765 769Right-handed 310
Helix 6
6
A
771 778Right-handed alpha
Helix 7
7
A
780 797Right-handed alpha
Helix 8
8
A
800 813Right-handed alpha
Helix 9
9
A
823 843Right-handed alpha
Helix 10
10
A
853 883Right-handed alpha
Helix 11
11
A
894 902Right-handed alpha
Helix 12
12
A
902 908Right-handed alpha
Helix 13
13
B
2 8Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4OLM.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
815 817first strand
Strand 2
A
911 913anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il