Analysis of interatomic Contacts of Structural Units in PDB entry:
4OMT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OMT entry

There is 1 chain in PDB entry 4OMT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8TYR 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4OMT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 44Right-handed alpha
Helix 2
2
A
55 61Right-handed alpha
Helix 3
3
A
94 109Right-handed alpha
Helix 4
4
A
118 131Right-handed alpha
Helix 5
5
A
133 139Right-handed alpha
Helix 6
6
A
177 193Right-handed alpha
Helix 7
7
A
213 224Right-handed alpha
Helix 8
8
A
239 253Right-handed alpha
Helix 9
9
A
275 287Right-handed alpha
Helix 10
10
A
306 326Right-handed alpha
Helix 11
11
A
348 356Right-handed alpha
Helix 12
12
A
356 364Right-handed alpha
Helix 13
13
A
366 375Right-handed alpha
Helix 14
14
A
376 390Right-handed alpha
Helix 15
15
A
414 429Right-handed alpha
Helix 16
16
A
440 446Right-handed alpha
Helix 17
17
A
452 457Right-handed 310
Helix 18
18
A
474 476Right-handed 310
Helix 19
19
A
477 488Right-handed alpha
Helix 20
20
A
498 515Right-handed alpha
Helix 21
21
A
541 557Right-handed alpha
Helix 22
22
A
578 588Right-handed alpha
Helix 23
23
A
601 617Right-handed alpha
Helix 24
24
A
636 648Right-handed alpha
Helix 25
25
A
669 694Right-handed alpha
Helix 26
26
A
704 706Right-handed 310
Helix 27
27
A
723 727Right-handed alpha
Helix 28
28
A
740 744Right-handed 310
Helix 29
29
A
745 753Right-handed alpha
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There are 6 sheets in PDB entry 4OMT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
17 22parallel
Strand 3
A
112 117parallel
Strand 4
A
157 162parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
258 262parallel
Strand 3
A
202 206parallel
Strand 4
A
291 294parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 339first strand
Strand 2
A
342 347anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 450first strand
Strand 2
A
432 436anti-parallel
Strand 3
A
402 408parallel
Strand 4
A
493 497parallel
Strand 5
A
522 526parallel
Strand 6
A
708 714parallel
Strand 7
A
717 722anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 594first strand
Strand 2
A
622 628parallel
Strand 3
A
566 572parallel
Strand 4
A
653 658parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
730 731first strand
Strand 2
A
736 737anti-parallel
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