Analysis of interatomic Contacts of Structural Units in PDB entry:
4OT6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OT6 entry

There is 1 chain in PDB entry 4OT6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 394GLU 658
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 4OT6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
398 400Right-handed 310
Helix 2
2
A
438 451Right-handed alpha
Helix 3
3
A
482 488Right-handed alpha
Helix 4
4
A
489 492Right-handed 310
Helix 5
5
A
494 515Right-handed alpha
Helix 6
6
A
523 525Right-handed 310
Helix 7
7
A
541 546Right-handed 310
Helix 8
8
A
548 553Right-handed alpha
Helix 9
9
A
560 564Right-handed 310
Helix 10
10
A
565 572Right-handed alpha
Helix 11
11
A
575 592Right-handed alpha
Helix 12
12
A
602 612Right-handed alpha
Helix 13
13
A
623 633Right-handed alpha
Helix 14
14
A
637 641Right-handed 310
Helix 15
15
A
643 658Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4OT6. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
402 411first strand
Strand 2
A
414 421anti-parallel
Strand 3
A
425 431anti-parallel
Strand 4
A
471 475anti-parallel
Strand 5
A
460 464anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
480 481first strand
Strand 2
A
527 529anti-parallel
Strand 3
A
535 537anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il