Analysis of interatomic Contacts of Structural Units in PDB entry:
4OVY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OVY entry

There is 1 chain in PDB entry 4OVY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24SER 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4OVY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 48Right-handed alpha
Helix 2
AA2
A
56 59Right-handed 310
Helix 3
AA3
A
77 91Right-handed alpha
Helix 4
AA4
A
92 99Right-handed 310
Helix 5
AA5
A
102 108Right-handed alpha
Helix 6
AA6
A
110 115Right-handed alpha
Helix 7
AA7
A
117 130Right-handed alpha
Helix 8
AA8
A
134 149Right-handed alpha
Helix 9
AA9
A
157 161Right-handed 310
Helix 10
AB1
A
163 176Right-handed alpha
Helix 11
AB2
A
188 192Right-handed alpha
Helix 12
AB3
A
194 200Right-handed alpha
Helix 13
AB4
A
202 204Right-handed 310
Helix 14
AB5
A
237 247Right-handed alpha
Helix 15
AB6
A
258 260Right-handed 310
Helix 16
AB7
A
261 270Right-handed alpha
Helix 17
AB8
A
301 311Right-handed alpha
Helix 18
AB9
A
317 321Right-handed alpha
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There are 2 sheets in PDB entry 4OVY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 232first strand
Strand 2
A
206 218anti-parallel
Strand 3
A
179 187parallel
Strand 4
A
61 64parallel
Strand 5
A
253 256parallel
Strand 6
A
276 283parallel
Strand 7
A
290 291anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 232first strand
Strand 2
A
206 218anti-parallel
Strand 3
A
179 187parallel
Strand 4
A
61 64parallel
Strand 5
A
253 256parallel
Strand 6
A
276 283parallel
Strand 7
A
313 316parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il