Analysis of interatomic Contacts of Structural Units in PDB entry:
4P0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4P0S entry

There are 20 chains in PDB entry 4P0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 256THR 551
B
ASN 233LEU 566
C
GLN 256THR 551
D
ASN 233LEU 566
E
GLN 256THR 551
F
ASN 233LEU 566
G
GLN 256THR 551
H
ASN 233LEU 566
I
G 1 T 12
J
A 23 G 45
L
T 47 T 55
M
G 1 T 12
N
A 23 G 45
P
T 47 T 55
Q
G 1 T 12
R
A 23 G 45
T
T 47 T 55
U
G 1 T 12
V
A 23 G 45
X
T 47 T 55
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 4P0S. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
286 294Right-handed alpha
Helix 2
AA2
A
336 346Right-handed alpha
Helix 3
AA3
A
347 358Right-handed alpha
Helix 4
AA4
A
380 394Right-handed alpha
Helix 5
AA5
A
404 423Right-handed alpha
Helix 6
AA6
A
456 463Right-handed alpha
Helix 7
AA7
A
473 480Right-handed alpha
Helix 8
AA8
A
486 497Right-handed alpha
Helix 9
AA9
A
499 510Right-handed alpha
Helix 10
AB1
A
512 518Right-handed alpha
Helix 11
AB2
A
534 546Right-handed alpha
Helix 12
AB3
B
238 242Right-handed 310
Helix 13
AB4
B
247 250Right-handed 310
Helix 14
AB5
B
257 262Right-handed alpha
Helix 15
AB6
B
265 275Right-handed alpha
Helix 16
AB7
B
318 329Right-handed alpha
Helix 17
AB8
B
343 355Right-handed alpha
Helix 18
AB9
B
404 419Right-handed alpha
Helix 19
AC1
B
428 456Right-handed alpha
Helix 20
AC2
B
457 462Right-handed 310
Helix 21
AC3
B
477 488Right-handed alpha
Helix 22
AC4
B
493 504Right-handed alpha
Helix 23
AC5
B
506 516Right-handed alpha
Helix 24
AC6
B
546 559Right-handed alpha
Helix 25
AC7
C
286 294Right-handed alpha
Helix 26
AC8
C
336 346Right-handed alpha
Helix 27
AC9
C
347 358Right-handed alpha
Helix 28
AD1
C
380 394Right-handed alpha
Helix 29
AD2
C
404 423Right-handed alpha
Helix 30
AD3
C
456 462Right-handed alpha
Helix 31
AD4
C
473 480Right-handed alpha
Helix 32
AD5
C
486 497Right-handed alpha
Helix 33
AD6
C
499 510Right-handed alpha
Helix 34
AD7
C
512 518Right-handed alpha
Helix 35
AD8
C
535 545Right-handed alpha
Helix 36
AD9
D
247 250Right-handed 310
Helix 37
AE1
D
257 262Right-handed alpha
Helix 38
AE2
D
265 275Right-handed alpha
Helix 39
AE3
D
318 329Right-handed alpha
Helix 40
AE4
D
343 355Right-handed alpha
Helix 41
AE5
D
404 419Right-handed alpha
Helix 42
AE6
D
428 456Right-handed alpha
Helix 43
AE7
D
457 461Right-handed 310
Helix 44
AE8
D
477 488Right-handed alpha
Helix 45
AE9
D
493 504Right-handed alpha
Helix 46
AF1
D
506 516Right-handed alpha
Helix 47
AF2
D
546 559Right-handed alpha
Helix 48
AF3
E
286 294Right-handed alpha
Helix 49
AF4
E
336 346Right-handed alpha
Helix 50
AF5
E
347 358Right-handed alpha
Helix 51
AF6
E
380 394Right-handed alpha
Helix 52
AF7
E
404 423Right-handed alpha
Helix 53
AF8
E
456 463Right-handed alpha
Helix 54
AF9
E
473 480Right-handed alpha
Helix 55
AG1
E
486 497Right-handed alpha
Helix 56
AG2
E
499 510Right-handed alpha
Helix 57
AG3
E
512 518Right-handed alpha
Helix 58
AG4
E
534 546Right-handed alpha
Helix 59
AG5
F
247 250Right-handed 310
Helix 60
AG6
F
257 262Right-handed alpha
Helix 61
AG7
F
265 275Right-handed alpha
Helix 62
AG8
F
318 329Right-handed alpha
Helix 63
AG9
F
343 355Right-handed alpha
Helix 64
AH1
F
404 419Right-handed alpha
Helix 65
AH2
F
428 456Right-handed alpha
Helix 66
AH3
F
457 461Right-handed 310
Helix 67
AH4
F
477 488Right-handed alpha
Helix 68
AH5
F
493 504Right-handed alpha
Helix 69
AH6
F
506 516Right-handed alpha
Helix 70
AH7
F
546 559Right-handed alpha
Helix 71
AH8
G
286 294Right-handed alpha
Helix 72
AH9
G
336 346Right-handed alpha
Helix 73
AI1
G
347 358Right-handed alpha
Helix 74
AI2
G
380 394Right-handed alpha
Helix 75
AI3
G
404 423Right-handed alpha
Helix 76
AI4
G
456 462Right-handed alpha
Helix 77
AI5
G
473 480Right-handed alpha
Helix 78
AI6
G
486 497Right-handed alpha
Helix 79
AI7
G
499 510Right-handed alpha
Helix 80
AI8
G
512 518Right-handed alpha
Helix 81
AI9
G
534 546Right-handed alpha
Helix 82
AJ1
H
247 250Right-handed 310
Helix 83
AJ2
H
257 262Right-handed alpha
Helix 84
AJ3
H
265 275Right-handed alpha
Helix 85
AJ4
H
318 329Right-handed alpha
Helix 86
AJ5
H
343 355Right-handed alpha
Helix 87
AJ6
H
404 419Right-handed alpha
Helix 88
AJ7
H
428 456Right-handed alpha
Helix 89
AJ8
H
457 462Right-handed 310
Helix 90
AJ9
H
477 488Right-handed alpha
Helix 91
AK1
H
493 504Right-handed alpha
Helix 92
AK2
H
506 516Right-handed alpha
Helix 93
AK3
H
546 559Right-handed alpha
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There are 17 sheets in PDB entry 4P0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
261 262first strand
Strand 2
A
428 431anti-parallel
Strand 3
A
452 455parallel
Strand 4
A
325 335anti-parallel
Strand 5
A
308 314anti-parallel
Strand 6
A
267 274anti-parallel
Strand 7
A
298 301parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
261 262first strand
Strand 2
A
428 431anti-parallel
Strand 3
A
452 455parallel
Strand 4
A
325 335anti-parallel
Strand 5
A
363 368parallel
Strand 6
A
398 401parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
280 282first strand
Strand 2
B
252 256parallel
Strand 3
B
290 295anti-parallel
Strand 4
B
307 308anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
280 282first strand
Strand 2
B
252 256parallel
Strand 3
B
290 295anti-parallel
Strand 4
B
311 317anti-parallel
Strand 5
B
358 364parallel
Strand 6
B
422 426parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
261 262first strand
Strand 2
C
428 431anti-parallel
Strand 3
C
452 455parallel
Strand 4
C
325 335anti-parallel
Strand 5
C
308 314anti-parallel
Strand 6
C
267 274anti-parallel
Strand 7
C
298 301parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
261 262first strand
Strand 2
C
428 431anti-parallel
Strand 3
C
452 455parallel
Strand 4
C
325 335anti-parallel
Strand 5
C
363 368parallel
Strand 6
C
398 401parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
280 282first strand
Strand 2
D
252 256parallel
Strand 3
D
290 295anti-parallel
Strand 4
D
307 308anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
280 282first strand
Strand 2
D
252 256parallel
Strand 3
D
290 295anti-parallel
Strand 4
D
311 317anti-parallel
Strand 5
D
358 364parallel
Strand 6
D
422 426parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
261 262first strand
Strand 2
E
428 431anti-parallel
Strand 3
E
452 455parallel
Strand 4
E
325 335anti-parallel
Strand 5
E
308 314anti-parallel
Strand 6
E
267 274anti-parallel
Strand 7
E
298 301parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
261 262first strand
Strand 2
E
428 431anti-parallel
Strand 3
E
452 455parallel
Strand 4
E
325 335anti-parallel
Strand 5
E
363 368parallel
Strand 6
E
398 401parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
524 525first strand
Strand 2
E
530 531anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
280 282first strand
Strand 2
F
252 256parallel
Strand 3
F
290 295anti-parallel
Strand 4
F
307 308anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
280 282first strand
Strand 2
F
252 256parallel
Strand 3
F
290 295anti-parallel
Strand 4
F
311 317anti-parallel
Strand 5
F
358 364parallel
Strand 6
F
422 426parallel
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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
261 262first strand
Strand 2
G
428 431anti-parallel
Strand 3
G
452 455parallel
Strand 4
G
325 335anti-parallel
Strand 5
G
308 314anti-parallel
Strand 6
G
267 274anti-parallel
Strand 7
G
298 301parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
261 262first strand
Strand 2
G
428 431anti-parallel
Strand 3
G
452 455parallel
Strand 4
G
325 335anti-parallel
Strand 5
G
363 368parallel
Strand 6
G
398 401parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
280 282first strand
Strand 2
H
252 256parallel
Strand 3
H
290 295anti-parallel
Strand 4
H
307 308anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
280 282first strand
Strand 2
H
252 256parallel
Strand 3
H
290 295anti-parallel
Strand 4
H
311 317anti-parallel
Strand 5
H
358 364parallel
Strand 6
H
422 426parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il