Analysis of interatomic Contacts of Structural Units in PDB entry:
4PL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PL0 entry

There are 2 chains in PDB entry 4PL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 9THR 579
B
 LYS 4THR 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4PL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 16Right-handed alpha
Helix 2
AA2
A
18 54Right-handed alpha
Helix 3
AA3
A
58 111Right-handed alpha
Helix 4
AA4
A
113 118Right-handed alpha
Helix 5
AA5
A
121 146Right-handed alpha
Helix 6
AA6
A
147 164Right-handed alpha
Helix 7
AA7
A
166 215Right-handed alpha
Helix 8
AA8
A
215 222Right-handed alpha
Helix 9
AA9
A
224 278Right-handed alpha
Helix 10
AB1
A
282 323Right-handed alpha
Helix 11
AB2
A
383 392Right-handed alpha
Helix 12
AB3
A
410 412Right-handed 310
Helix 13
AB4
A
413 420Right-handed alpha
Helix 14
AB5
A
434 441Right-handed alpha
Helix 15
AB6
A
447 458Right-handed alpha
Helix 16
AB7
A
475 479Right-handed 310
Helix 17
AB8
A
482 497Right-handed alpha
Helix 18
AB9
A
512 527Right-handed alpha
Helix 19
AC1
A
564 569Right-handed alpha
Helix 20
AC2
A
569 577Right-handed alpha
Helix 21
AC3
B
5 16Right-handed alpha
Helix 22
AC4
B
18 54Right-handed alpha
Helix 23
AC5
B
61 111Right-handed alpha
Helix 24
AC6
B
113 118Right-handed alpha
Helix 25
AC7
B
121 147Right-handed alpha
Helix 26
AC8
B
147 164Right-handed alpha
Helix 27
AC9
B
166 215Right-handed alpha
Helix 28
AD1
B
215 222Right-handed alpha
Helix 29
AD2
B
224 278Right-handed alpha
Helix 30
AD3
B
282 296Right-handed alpha
Helix 31
AD4
B
296 326Right-handed alpha
Helix 32
AD5
B
383 392Right-handed alpha
Helix 33
AD6
B
410 412Right-handed 310
Helix 34
AD7
B
413 420Right-handed alpha
Helix 35
AD8
B
434 441Right-handed alpha
Helix 36
AD9
B
447 458Right-handed alpha
Helix 37
AE1
B
475 479Right-handed 310
Helix 38
AE2
B
482 497Right-handed alpha
Helix 39
AE3
B
512 527Right-handed alpha
Helix 40
AE4
B
538 544Right-handed alpha
Helix 41
AE5
B
561 566Right-handed alpha
Helix 42
AE6
B
569 576Right-handed alpha
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There are 6 sheets in PDB entry 4PL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 368first strand
Strand 2
A
345 353anti-parallel
Strand 3
A
399 404anti-parallel
Strand 4
A
407 408anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 424first strand
Strand 2
A
501 505parallel
Strand 3
A
531 535parallel
Strand 4
A
373 377parallel
Strand 5
A
547 552parallel
Strand 6
A
555 558anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 463first strand
Strand 2
A
466 467anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
361 368first strand
Strand 2
B
345 352anti-parallel
Strand 3
B
399 404anti-parallel
Strand 4
B
407 408anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 424first strand
Strand 2
B
501 505parallel
Strand 3
B
531 535parallel
Strand 4
B
373 377parallel
Strand 5
B
547 552parallel
Strand 6
B
555 558anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
462 463first strand
Strand 2
B
466 467anti-parallel
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