Analysis of interatomic Contacts of Structural Units in PDB entry:
4PYP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PYP entry

There is 1 chain in PDB entry 4PYP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 9THR 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4PYP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 31Right-handed alpha
Helix 2
2
A
36 53Right-handed alpha
Helix 3
3
A
57 91Right-handed alpha
Helix 4
4
A
92 112Right-handed alpha
Helix 5
5
A
112 117Right-handed alpha
Helix 6
6
A
119 148Right-handed alpha
Helix 7
7
A
152 174Right-handed alpha
Helix 8
8
A
185 192Right-handed alpha
Helix 9
9
A
193 204Right-handed alpha
Helix 10
10
A
205 207Right-handed 310
Helix 11
11
A
210 216Right-handed alpha
Helix 12
12
A
220 232Right-handed alpha
Helix 13
13
A
237 254Right-handed alpha
Helix 14
14
A
258 265Right-handed alpha
Helix 15
15
A
265 270Right-handed alpha
Helix 16
16
A
270 284Right-handed alpha
Helix 17
17
A
286 293Right-handed alpha
Helix 18
18
A
293 302Right-handed alpha
Helix 19
19
A
305 331Right-handed alpha
Helix 20
20
A
332 358Right-handed alpha
Helix 21
21
A
359 360Right-handed 310
Helix 22
22
A
361 362Right-handed 310
Helix 23
23
A
363 382Right-handed alpha
Helix 24
24
A
385 395Right-handed alpha
Helix 25
25
A
399 422Right-handed alpha
Helix 26
26
A
423 428Right-handed alpha
Helix 27
27
A
429 431Right-handed 310
Helix 28
28
A
432 451Right-handed alpha
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There are no sheets in PDB entry 4PYP
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