Analysis of interatomic Contacts of Structural Units in PDB entry:
4PZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4PZE entry

There are 9 chains in PDB entry 4PZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 284
B
 SER 2LYS 284
C
 SER 2LYS 284
D
 SER 2LYS 284
E
 SER 2LYS 284
F
 SER 2LYS 284
G
 SER 2LYS 284
H
 SER 2LYS 284
I
 SER 2LYS 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are135 helices in PDB entry 4PZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
35 56Right-handed alpha
Helix 3
3
A
60 70Right-handed alpha
Helix 4
4
A
78 83Right-handed 310
Helix 5
5
A
93 108Right-handed alpha
Helix 6
6
A
122 128Right-handed alpha
Helix 7
7
A
132 134Right-handed 310
Helix 8
8
A
160 175Right-handed alpha
Helix 9
9
A
188 206Right-handed alpha
Helix 10
10
A
210 222Right-handed alpha
Helix 11
11
A
227 236Right-handed alpha
Helix 12
12
A
236 251Right-handed alpha
Helix 13
13
A
253 257Right-handed 310
Helix 14
14
A
259 269Right-handed alpha
Helix 15
15
A
272 276Right-handed 310
Helix 16
16
B
14 24Right-handed alpha
Helix 17
17
B
36 56Right-handed alpha
Helix 18
18
B
60 71Right-handed alpha
Helix 19
19
B
78 83Right-handed 310
Helix 20
20
B
93 108Right-handed alpha
Helix 21
21
B
122 128Right-handed alpha
Helix 22
22
B
132 134Right-handed 310
Helix 23
23
B
160 174Right-handed alpha
Helix 24
24
B
188 207Right-handed alpha
Helix 25
25
B
210 223Right-handed alpha
Helix 26
26
B
227 236Right-handed alpha
Helix 27
27
B
236 252Right-handed alpha
Helix 28
28
B
253 257Right-handed 310
Helix 29
29
B
259 268Right-handed alpha
Helix 30
30
B
272 276Right-handed 310
Helix 31
31
C
12 24Right-handed alpha
Helix 32
32
C
35 56Right-handed alpha
Helix 33
33
C
60 69Right-handed alpha
Helix 34
34
C
76 83Right-handed 310
Helix 35
35
C
93 106Right-handed alpha
Helix 36
36
C
122 129Right-handed alpha
Helix 37
37
C
132 134Right-handed 310
Helix 38
38
C
160 174Right-handed alpha
Helix 39
39
C
188 207Right-handed alpha
Helix 40
40
C
210 223Right-handed alpha
Helix 41
41
C
227 236Right-handed alpha
Helix 42
42
C
236 252Right-handed alpha
Helix 43
43
C
253 257Right-handed 310
Helix 44
44
C
259 268Right-handed alpha
Helix 45
45
C
272 276Right-handed 310
Helix 46
46
D
12 24Right-handed alpha
Helix 47
47
D
36 56Right-handed alpha
Helix 48
48
D
62 67Right-handed alpha
Helix 49
49
D
76 82Right-handed 310
Helix 50
50
D
93 108Right-handed alpha
Helix 51
51
D
122 128Right-handed alpha
Helix 52
52
D
132 134Right-handed 310
Helix 53
53
D
160 174Right-handed alpha
Helix 54
54
D
188 206Right-handed alpha
Helix 55
55
D
210 222Right-handed alpha
Helix 56
56
D
227 236Right-handed alpha
Helix 57
57
D
236 251Right-handed alpha
Helix 58
58
D
253 257Right-handed 310
Helix 59
59
D
259 269Right-handed alpha
Helix 60
60
D
272 276Right-handed 310
Helix 61
61
E
12 25Right-handed alpha
Helix 62
62
E
36 56Right-handed alpha
Helix 63
63
E
60 70Right-handed alpha
Helix 64
64
E
76 83Right-handed 310
Helix 65
65
E
93 108Right-handed alpha
Helix 66
66
E
122 128Right-handed alpha
Helix 67
67
E
132 136Right-handed 310
Helix 68
68
E
160 174Right-handed alpha
Helix 69
69
E
188 206Right-handed alpha
Helix 70
70
E
210 223Right-handed alpha
Helix 71
71
E
227 236Right-handed alpha
Helix 72
72
E
236 252Right-handed alpha
Helix 73
73
E
253 257Right-handed 310
Helix 74
74
E
259 268Right-handed alpha
Helix 75
75
E
272 276Right-handed 310
Helix 76
76
F
12 24Right-handed alpha
Helix 77
77
F
35 56Right-handed alpha
Helix 78
78
F
60 70Right-handed alpha
Helix 79
79
F
76 81Right-handed 310
Helix 80
80
F
93 108Right-handed alpha
Helix 81
81
F
122 129Right-handed alpha
Helix 82
82
F
132 134Right-handed 310
Helix 83
83
F
160 174Right-handed alpha
Helix 84
84
F
188 206Right-handed alpha
Helix 85
85
F
210 223Right-handed alpha
Helix 86
86
F
227 236Right-handed alpha
Helix 87
87
F
236 252Right-handed alpha
Helix 88
88
F
253 257Right-handed 310
Helix 89
89
F
259 269Right-handed alpha
Helix 90
90
F
272 276Right-handed 310
Helix 91
91
G
12 25Right-handed alpha
Helix 92
92
G
35 56Right-handed alpha
Helix 93
93
G
61 71Right-handed alpha
Helix 94
94
G
76 83Right-handed 310
Helix 95
95
G
93 108Right-handed alpha
Helix 96
96
G
122 128Right-handed alpha
Helix 97
97
G
132 134Right-handed 310
Helix 98
98
G
160 174Right-handed alpha
Helix 99
99
G
188 206Right-handed alpha
Helix 100
100
G
210 223Right-handed alpha
Helix 101
101
G
227 236Right-handed alpha
Helix 102
102
G
236 251Right-handed alpha
Helix 103
103
G
253 257Right-handed 310
Helix 104
104
G
259 269Right-handed alpha
Helix 105
105
G
272 276Right-handed 310
Helix 106
106
H
12 24Right-handed alpha
Helix 107
107
H
35 56Right-handed alpha
Helix 108
108
H
60 70Right-handed alpha
Helix 109
109
H
76 80Right-handed 310
Helix 110
110
H
93 107Right-handed alpha
Helix 111
111
H
122 128Right-handed alpha
Helix 112
112
H
132 134Right-handed 310
Helix 113
113
H
160 174Right-handed alpha
Helix 114
114
H
188 206Right-handed alpha
Helix 115
115
H
210 223Right-handed alpha
Helix 116
116
H
227 236Right-handed alpha
Helix 117
117
H
236 252Right-handed alpha
Helix 118
118
H
253 257Right-handed 310
Helix 119
119
H
259 268Right-handed alpha
Helix 120
120
H
272 276Right-handed 310
Helix 121
121
I
12 24Right-handed alpha
Helix 122
122
I
35 56Right-handed alpha
Helix 123
123
I
60 69Right-handed alpha
Helix 124
124
I
76 81Right-handed 310
Helix 125
125
I
93 108Right-handed alpha
Helix 126
126
I
122 128Right-handed alpha
Helix 127
127
I
132 134Right-handed 310
Helix 128
128
I
160 174Right-handed alpha
Helix 129
129
I
188 206Right-handed alpha
Helix 130
130
I
210 223Right-handed alpha
Helix 131
131
I
227 236Right-handed alpha
Helix 132
132
I
236 252Right-handed alpha
Helix 133
133
I
253 257Right-handed 310
Helix 134
134
I
259 269Right-handed alpha
Helix 135
135
I
272 276Right-handed 310
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There are 11 sheets in PDB entry 4PZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 74first strand
Strand 2
A
28 32parallel
Strand 3
A
5 9parallel
Strand 4
A
85 88parallel
Strand 5
A
113 117parallel
Strand 6
A
136 141parallel
Strand 7
A
150 155anti-parallel
Strand 8
A
177 182parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
5 9parallel
Strand 3
B
85 88parallel
Strand 4
B
113 117parallel
Strand 5
B
136 139parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 155first strand
Strand 2
B
177 182parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 74first strand
Strand 2
C
28 32parallel
Strand 3
C
5 9parallel
Strand 4
C
85 88parallel
Strand 5
C
113 116parallel
Strand 6
C
136 140parallel
Strand 7
C
150 155anti-parallel
Strand 8
C
177 182parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 74first strand
Strand 2
D
28 32parallel
Strand 3
D
5 9parallel
Strand 4
D
85 88parallel
Strand 5
D
113 117parallel
Strand 6
D
136 141parallel
Strand 7
D
150 155anti-parallel
Strand 8
D
177 182parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
71 73first strand
Strand 2
E
28 32parallel
Strand 3
E
5 9parallel
Strand 4
E
85 88parallel
Strand 5
E
113 116parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
138 140first strand
Strand 2
E
151 155anti-parallel
Strand 3
E
178 182parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
71 74first strand
Strand 2
F
28 32parallel
Strand 3
F
5 9parallel
Strand 4
F
85 88parallel
Strand 5
F
113 116parallel
Strand 6
F
136 140parallel
Strand 7
F
150 155anti-parallel
Strand 8
F
177 182parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
28 32first strand
Strand 2
G
5 9parallel
Strand 3
G
85 88parallel
Strand 4
G
113 117parallel
Strand 5
G
136 140parallel
Strand 6
G
150 155anti-parallel
Strand 7
G
177 182parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
71 73first strand
Strand 2
H
28 31parallel
Strand 3
H
5 7parallel
Strand 4
H
85 88parallel
Strand 5
H
113 117parallel
Strand 6
H
136 141parallel
Strand 7
H
150 155anti-parallel
Strand 8
H
177 182parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
71 74first strand
Strand 2
I
28 32parallel
Strand 3
I
5 9parallel
Strand 4
I
85 88parallel
Strand 5
I
113 116parallel
Strand 6
I
136 140parallel
Strand 7
I
150 155anti-parallel
Strand 8
I
177 182parallel
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