Analysis of interatomic Contacts of Structural Units in PDB entry:
4Q62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Q62 entry

There is 1 chain in PDB entry 4Q62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3LYS 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4Q62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
26 29Right-handed 310
Helix 3
3
A
45 57Right-handed alpha
Helix 4
4
A
73 81Right-handed alpha
Helix 5
5
A
118 130Right-handed alpha
Helix 6
6
A
144 149Right-handed alpha
Helix 7
7
A
150 153Right-handed 310
Helix 8
8
A
172 180Right-handed alpha
Helix 9
9
A
196 203Right-handed alpha
Helix 10
10
A
221 230Right-handed alpha
Helix 11
11
A
241 246Right-handed 310
Helix 12
12
A
270 281Right-handed alpha
Helix 13
13
A
295 303Right-handed alpha
Helix 14
14
A
345 360Right-handed alpha
Helix 15
15
A
374 382Right-handed alpha
Helix 16
16
A
400 413Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4Q62.

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
36 38parallel
Strand 3
A
64 66parallel
Strand 4
A
88 90parallel
Strand 5
A
108 110parallel
Strand 6
A
135 137parallel
Strand 7
A
163 165parallel
Strand 8
A
187 189parallel
Strand 9
A
212 214parallel
Strand 10
A
235 237parallel
Strand 11
A
261 263parallel
Strand 12
A
286 288parallel
Strand 13
A
310 312parallel
Strand 14
A
365 367parallel
Strand 15
A
394 395parallel
Strand 16
A
398 399anti-parallel
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