Analysis of interatomic Contacts of Structural Units in PDB entry:
4QG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4QG8 entry

There are 4 chains in PDB entry 4QG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 24PRO 531
B
 THR 25PRO 531
C
 ASP 24PRO 531
D
 ASP 24PRO 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 4QG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 33Right-handed alpha
Helix 2
2
A
57 68Right-handed alpha
Helix 3
3
A
80 97Right-handed alpha
Helix 4
4
A
163 167Right-handed 310
Helix 5
5
A
222 235Right-handed alpha
Helix 6
6
A
247 259Right-handed alpha
Helix 7
7
A
273 279Right-handed alpha
Helix 8
8
A
279 287Right-handed alpha
Helix 9
9
A
294 301Right-handed alpha
Helix 10
10
A
302 304Right-handed 310
Helix 11
11
A
305 321Right-handed alpha
Helix 12
12
A
331 336Right-handed 310
Helix 13
13
A
341 355Right-handed alpha
Helix 14
14
A
362 367Right-handed alpha
Helix 15
15
A
370 387Right-handed alpha
Helix 16
16
A
390 401Right-handed alpha
Helix 17
17
A
407 423Right-handed alpha
Helix 18
18
A
435 443Right-handed alpha
Helix 19
19
A
456 463Right-handed alpha
Helix 20
20
A
464 466Right-handed 310
Helix 21
21
A
481 500Right-handed alpha
Helix 22
22
B
26 32Right-handed alpha
Helix 23
23
B
57 68Right-handed alpha
Helix 24
24
B
80 96Right-handed alpha
Helix 25
25
B
97 99Right-handed 310
Helix 26
26
B
145 149Right-handed 310
Helix 27
27
B
163 168Right-handed alpha
Helix 28
28
B
222 235Right-handed alpha
Helix 29
29
B
247 259Right-handed alpha
Helix 30
30
B
273 279Right-handed alpha
Helix 31
31
B
279 287Right-handed alpha
Helix 32
32
B
294 301Right-handed alpha
Helix 33
33
B
302 304Right-handed 310
Helix 34
34
B
305 321Right-handed alpha
Helix 35
35
B
331 336Right-handed 310
Helix 36
36
B
341 355Right-handed alpha
Helix 37
37
B
362 367Right-handed alpha
Helix 38
38
B
370 389Right-handed alpha
Helix 39
39
B
390 402Right-handed alpha
Helix 40
40
B
407 424Right-handed alpha
Helix 41
41
B
435 443Right-handed alpha
Helix 42
42
B
456 463Right-handed alpha
Helix 43
43
B
464 466Right-handed 310
Helix 44
44
B
481 500Right-handed alpha
Helix 45
45
C
25 33Right-handed alpha
Helix 46
46
C
57 68Right-handed alpha
Helix 47
47
C
80 96Right-handed alpha
Helix 48
48
C
97 99Right-handed 310
Helix 49
49
C
145 149Right-handed 310
Helix 50
50
C
163 168Right-handed alpha
Helix 51
51
C
222 235Right-handed alpha
Helix 52
52
C
247 259Right-handed alpha
Helix 53
53
C
273 279Right-handed alpha
Helix 54
54
C
279 287Right-handed alpha
Helix 55
55
C
294 301Right-handed alpha
Helix 56
56
C
302 304Right-handed 310
Helix 57
57
C
305 321Right-handed alpha
Helix 58
58
C
331 336Right-handed 310
Helix 59
59
C
341 355Right-handed alpha
Helix 60
60
C
362 367Right-handed alpha
Helix 61
61
C
370 387Right-handed alpha
Helix 62
62
C
390 401Right-handed alpha
Helix 63
63
C
407 423Right-handed alpha
Helix 64
64
C
435 443Right-handed alpha
Helix 65
65
C
456 463Right-handed alpha
Helix 66
66
C
464 466Right-handed 310
Helix 67
67
C
481 500Right-handed alpha
Helix 68
68
D
25 32Right-handed alpha
Helix 69
69
D
57 68Right-handed alpha
Helix 70
70
D
80 96Right-handed alpha
Helix 71
71
D
97 99Right-handed 310
Helix 72
72
D
222 235Right-handed alpha
Helix 73
73
D
247 259Right-handed alpha
Helix 74
74
D
273 279Right-handed alpha
Helix 75
75
D
279 287Right-handed alpha
Helix 76
76
D
294 301Right-handed alpha
Helix 77
77
D
302 304Right-handed 310
Helix 78
78
D
305 320Right-handed alpha
Helix 79
79
D
331 336Right-handed 310
Helix 80
80
D
341 355Right-handed alpha
Helix 81
81
D
362 367Right-handed alpha
Helix 82
82
D
370 387Right-handed alpha
Helix 83
83
D
390 401Right-handed alpha
Helix 84
84
D
407 424Right-handed alpha
Helix 85
85
D
435 443Right-handed alpha
Helix 86
86
D
456 463Right-handed alpha
Helix 87
87
D
464 466Right-handed 310
Helix 88
88
D
481 500Right-handed alpha
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There are 12 sheets in PDB entry 4QG8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
71 75parallel
Strand 3
A
109 113parallel
Strand 4
A
239 242parallel
Strand 5
A
266 271parallel
Strand 6
A
289 293parallel
Strand 7
A
324 327parallel
Strand 8
A
358 361parallel
Strand 9
A
46 50parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
202 203anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 158first strand
Strand 2
A
139 143parallel
Strand 3
A
192 199anti-parallel
Strand 4
A
181 188anti-parallel
Strand 5
A
173 176anti-parallel
Strand 6
A
209 210anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 473first strand
Strand 2
A
450 454parallel
Strand 3
A
428 431parallel
Strand 4
A
508 513parallel
Strand 5
A
524 529anti-parallel
Strand 6
B
524 529anti-parallel
Strand 7
B
508 513anti-parallel
Strand 8
B
428 431parallel
Strand 9
B
450 454parallel
Strand 10
B
469 473parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 50first strand
Strand 2
B
71 75parallel
Strand 3
B
109 113parallel
Strand 4
B
239 242parallel
Strand 5
B
266 271parallel
Strand 6
B
289 293parallel
Strand 7
B
324 327parallel
Strand 8
B
358 361parallel
Strand 9
B
46 50parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
208 210anti-parallel
Strand 3
B
173 176anti-parallel
Strand 4
B
181 188anti-parallel
Strand 5
B
192 199anti-parallel
Strand 6
B
139 143anti-parallel
Strand 7
B
156 158parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 134first strand
Strand 2
B
201 203anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 50first strand
Strand 2
C
71 75parallel
Strand 3
C
109 113parallel
Strand 4
C
239 242parallel
Strand 5
C
266 271parallel
Strand 6
C
289 293parallel
Strand 7
C
324 327parallel
Strand 8
C
358 361parallel
Strand 9
C
46 50parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 134first strand
Strand 2
C
201 203anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 158first strand
Strand 2
C
139 143parallel
Strand 3
C
192 199anti-parallel
Strand 4
C
181 188anti-parallel
Strand 5
C
173 176anti-parallel
Strand 6
C
209 210anti-parallel
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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
469 473first strand
Strand 2
C
450 454parallel
Strand 3
C
428 431parallel
Strand 4
C
508 513parallel
Strand 5
C
524 529anti-parallel
Strand 6
D
524 529anti-parallel
Strand 7
D
508 513anti-parallel
Strand 8
D
428 431parallel
Strand 9
D
450 454parallel
Strand 10
D
469 473parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 50first strand
Strand 2
D
71 75parallel
Strand 3
D
109 113parallel
Strand 4
D
239 242parallel
Strand 5
D
266 271parallel
Strand 6
D
289 293parallel
Strand 7
D
324 327parallel
Strand 8
D
358 361parallel
Strand 9
D
46 50parallel
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