Analysis of interatomic Contacts of Structural Units in PDB entry:
4RC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RC1 entry

There are 6 chains in PDB entry 4RC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -5LYS 235
B
 MET -6LYS 235
C
 HIS 0LYS 235
D
 MET -6LYS 235
E
 HIS 0LYS 235
F
 HIS -2VAL 131
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are125 helices in PDB entry 4RC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 20Right-handed alpha
Helix 2
2
A
28 32Right-handed 310
Helix 3
3
A
38 49Right-handed alpha
Helix 4
4
A
65 79Right-handed alpha
Helix 5
5
A
93 112Right-handed alpha
Helix 6
6
A
124 128Right-handed 310
Helix 7
7
A
132 134Right-handed 310
Helix 8
8
A
135 144Right-handed alpha
Helix 9
9
A
159 164Right-handed alpha
Helix 10
10
A
165 179Right-handed alpha
Helix 11
11
A
190 192Right-handed 310
Helix 12
12
A
193 200Right-handed alpha
Helix 13
13
A
208 212Right-handed 310
Helix 14
14
A
223 234Right-handed alpha
Helix 15
15
B
9 20Right-handed alpha
Helix 16
16
B
28 32Right-handed 310
Helix 17
17
B
38 49Right-handed alpha
Helix 18
18
B
65 79Right-handed alpha
Helix 19
19
B
93 112Right-handed alpha
Helix 20
20
B
124 128Right-handed 310
Helix 21
21
B
132 134Right-handed 310
Helix 22
22
B
135 144Right-handed alpha
Helix 23
23
B
159 164Right-handed alpha
Helix 24
24
B
165 179Right-handed alpha
Helix 25
25
B
190 192Right-handed 310
Helix 26
26
B
193 200Right-handed alpha
Helix 27
27
B
208 212Right-handed 310
Helix 28
28
B
223 235Right-handed alpha
Helix 29
29
C
9 20Right-handed alpha
Helix 30
30
C
28 32Right-handed 310
Helix 31
31
C
38 49Right-handed alpha
Helix 32
32
C
65 79Right-handed alpha
Helix 33
33
C
93 112Right-handed alpha
Helix 34
34
C
124 128Right-handed 310
Helix 35
35
C
132 134Right-handed 310
Helix 36
36
C
135 144Right-handed alpha
Helix 37
37
C
159 164Right-handed alpha
Helix 38
38
C
165 179Right-handed alpha
Helix 39
39
C
190 192Right-handed 310
Helix 40
40
C
193 200Right-handed alpha
Helix 41
41
C
208 212Right-handed 310
Helix 42
42
C
223 235Right-handed alpha
Helix 43
43
D
9 19Right-handed alpha
Helix 44
44
D
28 32Right-handed 310
Helix 45
45
D
38 49Right-handed alpha
Helix 46
46
D
65 79Right-handed alpha
Helix 47
47
D
93 110Right-handed alpha
Helix 48
48
D
124 128Right-handed 310
Helix 49
49
D
132 134Right-handed 310
Helix 50
50
D
135 144Right-handed alpha
Helix 51
51
D
159 164Right-handed alpha
Helix 52
52
D
165 179Right-handed alpha
Helix 53
53
D
190 192Right-handed 310
Helix 54
54
D
193 200Right-handed alpha
Helix 55
55
D
208 212Right-handed 310
Helix 56
56
D
223 235Right-handed alpha
Helix 57
57
E
9 20Right-handed alpha
Helix 58
58
E
28 32Right-handed 310
Helix 59
59
E
38 49Right-handed alpha
Helix 60
60
E
65 79Right-handed alpha
Helix 61
61
E
93 112Right-handed alpha
Helix 62
62
E
124 128Right-handed 310
Helix 63
63
E
132 134Right-handed 310
Helix 64
64
E
135 144Right-handed alpha
Helix 65
65
E
159 164Right-handed alpha
Helix 66
66
E
165 179Right-handed alpha
Helix 67
67
E
190 192Right-handed 310
Helix 68
68
E
193 200Right-handed alpha
Helix 69
69
E
208 212Right-handed 310
Helix 70
70
E
223 235Right-handed alpha
Helix 71
71
F
9 20Right-handed alpha
Helix 72
72
F
28 32Right-handed 310
Helix 73
73
F
38 49Right-handed alpha
Helix 74
74
F
65 79Right-handed alpha
Helix 75
75
F
93 112Right-handed alpha
Helix 76
76
F
124 128Right-handed 310
Helix 77
77
F
132 134Right-handed 310
Helix 78
78
F
135 144Right-handed alpha
Helix 79
79
F
159 164Right-handed alpha
Helix 80
80
F
165 179Right-handed alpha
Helix 81
81
F
190 192Right-handed 310
Helix 82
82
F
193 200Right-handed alpha
Helix 83
83
F
208 212Right-handed 310
Helix 84
84
F
223 234Right-handed alpha
Helix 85
85
G
9 19Right-handed alpha
Helix 86
86
G
28 32Right-handed 310
Helix 87
87
G
38 49Right-handed alpha
Helix 88
88
G
65 79Right-handed alpha
Helix 89
89
G
93 112Right-handed alpha
Helix 90
90
G
124 128Right-handed 310
Helix 91
91
G
132 134Right-handed 310
Helix 92
92
G
135 144Right-handed alpha
Helix 93
93
G
159 164Right-handed alpha
Helix 94
94
G
165 179Right-handed alpha
Helix 95
95
G
190 192Right-handed 310
Helix 96
96
G
193 200Right-handed alpha
Helix 97
97
G
208 212Right-handed 310
Helix 98
98
G
223 235Right-handed alpha
Helix 99
99
H
9 20Right-handed alpha
Helix 100
100
H
28 32Right-handed 310
Helix 101
101
H
38 49Right-handed alpha
Helix 102
102
H
65 79Right-handed alpha
Helix 103
103
H
93 112Right-handed alpha
Helix 104
104
H
124 128Right-handed 310
Helix 105
105
H
132 134Right-handed 310
Helix 106
106
H
135 144Right-handed alpha
Helix 107
107
H
159 164Right-handed alpha
Helix 108
108
H
165 179Right-handed alpha
Helix 109
109
H
190 192Right-handed 310
Helix 110
110
H
193 200Right-handed alpha
Helix 111
111
H
208 212Right-handed 310
Helix 112
112
H
223 235Right-handed alpha
Helix 113
113
I
9 19Right-handed alpha
Helix 114
114
I
28 32Right-handed 310
Helix 115
115
I
38 49Right-handed alpha
Helix 116
116
I
65 79Right-handed alpha
Helix 117
117
I
93 110Right-handed alpha
Helix 118
118
I
124 128Right-handed 310
Helix 119
119
I
132 134Right-handed 310
Helix 120
120
I
135 144Right-handed alpha
Helix 121
121
I
159 164Right-handed alpha
Helix 122
122
I
165 179Right-handed alpha
Helix 123
123
I
190 192Right-handed 310
Helix 124
124
I
193 201Right-handed alpha
Helix 125
125
I
223 235Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 4RC1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
23 26parallel
Strand 3
A
54 62parallel
Strand 4
A
83 88parallel
Strand 5
A
116 122parallel
Strand 6
A
147 151parallel
Strand 7
A
182 185parallel
Strand 8
A
204 207parallel
Strand 9
A
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
23 26parallel
Strand 3
B
54 62parallel
Strand 4
B
83 88parallel
Strand 5
B
116 122parallel
Strand 6
B
147 151parallel
Strand 7
B
182 185parallel
Strand 8
B
204 207parallel
Strand 9
B
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 5first strand
Strand 2
C
23 26parallel
Strand 3
C
54 62parallel
Strand 4
C
83 88parallel
Strand 5
C
116 122parallel
Strand 6
C
147 151parallel
Strand 7
C
182 185parallel
Strand 8
C
204 207parallel
Strand 9
C
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 5first strand
Strand 2
D
23 26parallel
Strand 3
D
54 62parallel
Strand 4
D
83 88parallel
Strand 5
D
116 122parallel
Strand 6
D
147 151parallel
Strand 7
D
182 185parallel
Strand 8
D
204 207parallel
Strand 9
D
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 5first strand
Strand 2
E
23 26parallel
Strand 3
E
54 62parallel
Strand 4
E
83 88parallel
Strand 5
E
116 122parallel
Strand 6
E
147 151parallel
Strand 7
E
182 185parallel
Strand 8
E
204 207parallel
Strand 9
E
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 5first strand
Strand 2
F
23 26parallel
Strand 3
F
54 62parallel
Strand 4
F
83 88parallel
Strand 5
F
116 122parallel
Strand 6
F
147 151parallel
Strand 7
F
182 185parallel
Strand 8
F
204 207parallel
Strand 9
F
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 5first strand
Strand 2
G
23 26parallel
Strand 3
G
54 62parallel
Strand 4
G
83 88parallel
Strand 5
G
116 122parallel
Strand 6
G
147 151parallel
Strand 7
G
182 185parallel
Strand 8
G
204 207parallel
Strand 9
G
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 5first strand
Strand 2
H
23 26parallel
Strand 3
H
54 62parallel
Strand 4
H
83 88parallel
Strand 5
H
116 122parallel
Strand 6
H
147 151parallel
Strand 7
H
182 185parallel
Strand 8
H
204 207parallel
Strand 9
H
2 5parallel
Back to list of sheets
Back to top of page

There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
2 5first strand
Strand 2
I
23 26parallel
Strand 3
I
54 62parallel
Strand 4
I
83 88parallel
Strand 5
I
116 122parallel
Strand 6
I
147 151parallel
Strand 7
I
182 185parallel
Strand 8
I
204 207parallel
Strand 9
I
2 5parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il