Analysis of interatomic Contacts of Structural Units in PDB entry:
4REC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4REC entry

There are 2 chains in PDB entry 4REC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 371VAL 1009
B
C 11 G 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4REC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
373 389Right-handed alpha
Helix 2
2
A
389 394Right-handed alpha
Helix 3
3
A
397 409Right-handed alpha
Helix 4
4
A
411 423Right-handed alpha
Helix 5
5
A
432 434Right-handed 310
Helix 6
6
A
443 453Right-handed alpha
Helix 7
7
A
460 462Right-handed 310
Helix 8
8
A
464 472Right-handed alpha
Helix 9
9
A
473 484Right-handed alpha
Helix 10
10
A
492 504Right-handed alpha
Helix 11
11
A
519 532Right-handed alpha
Helix 12
12
A
538 553Right-handed alpha
Helix 13
13
A
554 557Right-handed 310
Helix 14
14
A
576 581Right-handed 310
Helix 15
15
A
598 621Right-handed alpha
Helix 16
16
A
623 640Right-handed alpha
Helix 17
17
A
644 652Right-handed alpha
Helix 18
18
A
654 659Right-handed alpha
Helix 19
19
A
661 680Right-handed alpha
Helix 20
20
A
682 696Right-handed alpha
Helix 21
21
A
700 702Right-handed 310
Helix 22
22
A
703 717Right-handed alpha
Helix 23
23
A
721 735Right-handed alpha
Helix 24
24
A
739 755Right-handed alpha
Helix 25
25
A
756 766Right-handed 310
Helix 26
26
A
813 825Right-handed alpha
Helix 27
27
A
834 851Right-handed alpha
Helix 28
28
A
873 878Right-handed alpha
Helix 29
29
A
879 892Right-handed alpha
Helix 30
30
A
894 910Right-handed alpha
Helix 31
31
A
924 950Right-handed alpha
Helix 32
32
A
950 956Right-handed alpha
Helix 33
33
A
984 997Right-handed alpha
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There are 2 sheets in PDB entry 4REC. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
429 430first strand
Strand 2
A
534 537anti-parallel
Strand 3
A
456 458anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
778 783first strand
Strand 2
A
1001 1007parallel
Strand 3
A
971 977parallel
Strand 4
A
961 964anti-parallel
Strand 5
A
829 832anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il