Analysis of interatomic Contacts of Structural Units in PDB entry:
4TN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TN7 entry

There are 8 chains in PDB entry 4TN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 36GLU 364
B
 GLN 450PRO 517
C
 ARG 36GLU 364
D
 GLN 450PRO 517
E
 ALA 29VAL 35
E
 LYS 37PRO 38
F
 ALA 29VAL 35
F
 LYS 37PRO 38
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4TN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 46Right-handed alpha
Helix 2
AA2
A
58 62Right-handed 310
Helix 3
AA3
A
63 71Right-handed alpha
Helix 4
AA4
A
94 103Right-handed alpha
Helix 5
AA5
A
123 131Right-handed alpha
Helix 6
AA6
A
153 157Right-handed 310
Helix 7
AA7
A
160 167Right-handed alpha
Helix 8
AA8
A
167 172Right-handed alpha
Helix 9
AA9
A
174 179Right-handed alpha
Helix 10
AB1
A
214 218Right-handed 310
Helix 11
AB2
A
237 251Right-handed alpha
Helix 12
AB3
A
257 262Right-handed 310
Helix 13
AB4
A
304 318Right-handed alpha
Helix 14
AB5
A
321 325Right-handed 310
Helix 15
AB6
A
328 346Right-handed alpha
Helix 16
AB7
A
351 363Right-handed alpha
Helix 17
AB8
B
454 470Right-handed alpha
Helix 18
AB9
B
472 477Right-handed alpha
Helix 19
AC1
B
484 499Right-handed alpha
Helix 20
AC2
B
503 508Right-handed alpha
Helix 21
AC3
C
39 46Right-handed alpha
Helix 22
AC4
C
58 62Right-handed 310
Helix 23
AC5
C
63 71Right-handed alpha
Helix 24
AC6
C
94 103Right-handed alpha
Helix 25
AC7
C
123 132Right-handed alpha
Helix 26
AC8
C
153 157Right-handed 310
Helix 27
AC9
C
160 167Right-handed alpha
Helix 28
AD1
C
167 172Right-handed alpha
Helix 29
AD2
C
174 179Right-handed alpha
Helix 30
AD3
C
214 218Right-handed 310
Helix 31
AD4
C
237 251Right-handed alpha
Helix 32
AD5
C
252 255Right-handed 310
Helix 33
AD6
C
304 318Right-handed alpha
Helix 34
AD7
C
321 325Right-handed 310
Helix 35
AD8
C
328 346Right-handed alpha
Helix 36
AD9
C
351 363Right-handed alpha
Helix 37
AE1
D
454 470Right-handed alpha
Helix 38
AE2
D
472 477Right-handed alpha
Helix 39
AE3
D
484 499Right-handed alpha
Helix 40
AE4
D
503 508Right-handed alpha
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There are 4 sheets in PDB entry 4TN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
76 78parallel
Strand 3
A
275 278anti-parallel
Strand 4
A
219 226anti-parallel
Strand 5
A
292 299anti-parallel
Strand 6
A
199 203anti-parallel
Strand 7
A
141 147anti-parallel
Strand 8
A
107 112anti-parallel
Strand 9
A
118 122anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 212first strand
Strand 2
A
283 287anti-parallel
Strand 3
A
229 234anti-parallel
Strand 4
A
266 270anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 56first strand
Strand 2
C
76 78parallel
Strand 3
C
275 278anti-parallel
Strand 4
C
219 226anti-parallel
Strand 5
C
292 299anti-parallel
Strand 6
C
199 203anti-parallel
Strand 7
C
141 147anti-parallel
Strand 8
C
107 112anti-parallel
Strand 9
C
117 122anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 212first strand
Strand 2
C
283 287anti-parallel
Strand 3
C
229 234anti-parallel
Strand 4
C
266 270anti-parallel
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