Analysis of interatomic Contacts of Structural Units in PDB entry:
4UH6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UH6 entry

There are 2 chains in PDB entry 4UH6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 302LYS 722
B
 ARG 304LYS 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4UH6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
320 325Right-handed 310
Helix 2
2
A
355 374Right-handed alpha
Helix 3
3
A
379 397Right-handed alpha
Helix 4
4
A
402 416Right-handed alpha
Helix 5
5
A
422 426Right-handed 310
Helix 6
6
A
439 456Right-handed alpha
Helix 7
7
A
457 459Right-handed 310
Helix 8
8
A
503 513Right-handed alpha
Helix 9
9
A
542 546Right-handed 310
Helix 10
10
A
556 563Right-handed 310
Helix 11
11
A
595 600Right-handed alpha
Helix 12
12
A
600 605Right-handed alpha
Helix 13
13
A
611 619Right-handed alpha
Helix 14
14
A
625 628Right-handed 310
Helix 15
15
A
629 649Right-handed alpha
Helix 16
16
A
655 675Right-handed alpha
Helix 17
17
A
680 685Right-handed alpha
Helix 18
18
A
689 693Right-handed 310
Helix 19
19
A
693 697Right-handed 310
Helix 20
20
A
714 719Right-handed alpha
Helix 21
21
B
320 325Right-handed 310
Helix 22
22
B
355 374Right-handed alpha
Helix 23
23
B
379 397Right-handed alpha
Helix 24
24
B
402 416Right-handed alpha
Helix 25
25
B
422 426Right-handed 310
Helix 26
26
B
439 456Right-handed alpha
Helix 27
27
B
457 459Right-handed 310
Helix 28
28
B
503 513Right-handed alpha
Helix 29
29
B
542 546Right-handed 310
Helix 30
30
B
558 563Right-handed 310
Helix 31
31
B
595 600Right-handed alpha
Helix 32
32
B
600 605Right-handed alpha
Helix 33
33
B
611 619Right-handed alpha
Helix 34
34
B
625 628Right-handed 310
Helix 35
35
B
629 649Right-handed alpha
Helix 36
36
B
655 675Right-handed alpha
Helix 37
37
B
680 685Right-handed alpha
Helix 38
38
B
689 693Right-handed 310
Helix 39
39
B
693 697Right-handed 310
Helix 40
40
B
714 718Right-handed 310
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There are 14 sheets in PDB entry 4UH6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
316 319anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 433first strand
Strand 2
A
463 466parallel
Strand 3
A
589 590anti-parallel
Strand 4
A
571 572anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 479first strand
Strand 2
A
527 530anti-parallel
Strand 3
A
537 539anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 491first strand
Strand 2
A
497 499anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
548 550first strand
Strand 2
A
565 567anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 584first strand
Strand 2
A
576 579anti-parallel
Strand 3
A
708 710anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 594first strand
Strand 2
A
653 654parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 309first strand
Strand 2
B
316 319anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
430 433first strand
Strand 2
B
463 466parallel
Strand 3
B
589 590anti-parallel
Strand 4
B
571 572anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
478 479first strand
Strand 2
B
527 530anti-parallel
Strand 3
B
537 539anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
489 491first strand
Strand 2
B
497 499anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
548 550first strand
Strand 2
B
565 567anti-parallel
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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
582 584first strand
Strand 2
B
576 579anti-parallel
Strand 3
B
708 710anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
593 594first strand
Strand 2
B
653 654parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il