Analysis of interatomic Contacts of Structural Units in PDB entry:
4UHR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UHR entry

There is 1 chain in PDB entry 4UHR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 6ALA 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4UHR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 34Right-handed alpha
Helix 2
2
A
35 38Right-handed 310
Helix 3
3
A
39 58Right-handed alpha
Helix 4
4
A
58 69Right-handed alpha
Helix 5
5
A
73 108Right-handed alpha
Helix 6
6
A
111 116Right-handed alpha
Helix 7
7
A
117 137Right-handed alpha
Helix 8
8
A
138 142Right-handed 310
Helix 9
9
A
150 154Right-handed 310
Helix 10
10
A
167 172Right-handed alpha
Helix 11
11
A
173 180Right-handed alpha
Helix 12
12
A
180 186Right-handed alpha
Helix 13
13
A
186 213Right-handed alpha
Helix 14
14
A
219 259Right-handed alpha
Helix 15
15
A
266 279Right-handed alpha
Helix 16
16
A
279 284Right-handed alpha
Helix 17
17
A
285 292Right-handed alpha
Helix 18
18
A
292 312Right-handed alpha
Helix 19
19
A
313 315Right-handed 310
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There is 1 sheet ( AA) in PDB entry 4UHR.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
71 72first strand
Strand 2
A
164 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il