Analysis of interatomic Contacts of Structural Units in PDB entry:
4UM7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UM7 entry

There are 4 chains in PDB entry 4UM7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1GLN 173
B
 MET 1GLN 173
C
 HIS 0GLN 173
D
 HIS 0GLN 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4UM7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 9Right-handed alpha
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
65 76Right-handed alpha
Helix 4
4
A
86 99Right-handed alpha
Helix 5
5
A
101 103Right-handed 310
Helix 6
6
A
111 113Right-handed 310
Helix 7
7
A
114 121Right-handed alpha
Helix 8
8
A
131 137Right-handed alpha
Helix 9
9
A
149 162Right-handed alpha
Helix 10
10
A
164 171Right-handed alpha
Helix 11
11
B
1 9Right-handed alpha
Helix 12
12
B
41 53Right-handed alpha
Helix 13
13
B
65 76Right-handed alpha
Helix 14
14
B
86 98Right-handed alpha
Helix 15
15
B
101 103Right-handed 310
Helix 16
16
B
111 113Right-handed 310
Helix 17
17
B
114 121Right-handed alpha
Helix 18
18
B
131 137Right-handed alpha
Helix 19
19
B
149 162Right-handed alpha
Helix 20
20
B
164 171Right-handed alpha
Helix 21
21
C
0 9Right-handed alpha
Helix 22
22
C
41 53Right-handed alpha
Helix 23
23
C
65 76Right-handed alpha
Helix 24
24
C
86 99Right-handed alpha
Helix 25
25
C
101 103Right-handed 310
Helix 26
26
C
111 113Right-handed 310
Helix 27
27
C
114 121Right-handed alpha
Helix 28
28
C
131 137Right-handed alpha
Helix 29
29
C
149 162Right-handed alpha
Helix 30
30
C
164 171Right-handed alpha
Helix 31
31
D
0 9Right-handed alpha
Helix 32
32
D
41 53Right-handed alpha
Helix 33
33
D
65 76Right-handed alpha
Helix 34
34
D
86 99Right-handed alpha
Helix 35
35
D
101 103Right-handed 310
Helix 36
36
D
111 113Right-handed 310
Helix 37
37
D
114 121Right-handed alpha
Helix 38
38
D
131 137Right-handed alpha
Helix 39
39
D
149 162Right-handed alpha
Helix 40
40
D
164 171Right-handed alpha
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There are 5 sheets in PDB entry 4UM7. Click on sheet of interest to get list of strands forming it: AA, AB, BA, CA, A,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
56 60parallel
Strand 3
A
13 16parallel
Strand 4
A
105 108parallel
Strand 5
A
123 126parallel
Strand 6
A
140 141parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
C
35 40anti-parallel
Strand 3
C
26 30anti-parallel
Strand 4
B
35 40anti-parallel
Strand 5
B
26 30anti-parallel
Strand 6
D
35 40anti-parallel
Strand 7
D
26 30anti-parallel
Strand 8
A
35 40anti-parallel
Strand 9
A
26 30anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 81first strand
Strand 2
B
56 60parallel
Strand 3
B
13 16parallel
Strand 4
B
105 108parallel
Strand 5
B
123 126parallel
Strand 6
B
140 141parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 81first strand
Strand 2
C
56 60parallel
Strand 3
C
13 16parallel
Strand 4
C
105 108parallel
Strand 5
C
123 126parallel
Strand 6
C
140 141parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 81first strand
Strand 2
D
56 60parallel
Strand 3
D
13 16parallel
Strand 4
D
105 108parallel
Strand 5
D
123 126parallel
Strand 6
D
140 141parallel
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