Analysis of interatomic Contacts of Structural Units in PDB entry:
4UTA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UTA entry

There are 6 chains in PDB entry 4UTA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 395
B
 MET 1ARG 398
H
 VAL 2PRO 222
I
 VAL 2GLU 221
L
 SER 0GLU 214
M
 SER 0GLU 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4UTA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 87Right-handed 310
Helix 2
2
A
100 104Right-handed 310
Helix 3
3
A
131 133Right-handed 310
Helix 4
4
A
210 215Right-handed alpha
Helix 5
5
A
233 236Right-handed 310
Helix 6
6
A
256 264Right-handed alpha
Helix 7
7
B
82 87Right-handed 310
Helix 8
8
B
100 104Right-handed 310
Helix 9
9
B
131 133Right-handed 310
Helix 10
10
B
210 215Right-handed alpha
Helix 11
11
B
233 236Right-handed 310
Helix 12
12
B
256 264Right-handed alpha
Helix 13
13
H
28 30Right-handed 310
Helix 14
14
H
87 91Right-handed 310
Helix 15
15
H
196 199Right-handed 310
Helix 16
16
H
210 213Right-handed 310
Helix 17
17
I
28 30Right-handed 310
Helix 18
18
I
87 91Right-handed 310
Helix 19
19
I
194 199Right-handed 310
Helix 20
20
I
210 213Right-handed 310
Helix 21
21
L
79 83Right-handed 310
Helix 22
22
L
122 127Right-handed alpha
Helix 23
23
L
184 189Right-handed alpha
Helix 24
24
M
79 83Right-handed 310
Helix 25
25
M
122 127Right-handed alpha
Helix 26
26
M
184 189Right-handed alpha
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There are 43 sheets in PDB entry 4UTA. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, HA, HB, HC, HD, HE, HF, HG, HH, IA, IB, IC, ID, IE, IF, IG, IH, LA, LB, LC, LD, MA, MB, MC, MD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
30 35parallel
Strand 3
A
38 50anti-parallel
Strand 4
A
135 143anti-parallel
Strand 5
A
160 164anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 25first strand
Strand 2
A
282 288anti-parallel
Strand 3
A
179 188anti-parallel
Strand 4
A
170 175anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 99first strand
Strand 2
A
109 129anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 222first strand
Strand 2
A
54 72anti-parallel
Strand 3
A
109 129parallel
Strand 4
A
196 201anti-parallel
Strand 5
A
204 209anti-parallel
Strand 6
A
268 273anti-parallel
Strand 7
A
276 278anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 222first strand
Strand 2
A
54 72anti-parallel
Strand 3
A
109 129parallel
Strand 4
A
90 99anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
249 252anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 314first strand
Strand 2
A
320 325anti-parallel
Strand 3
A
365 370anti-parallel
Strand 4
A
350 351anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
357 358anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 340first strand
Strand 2
A
374 379anti-parallel
Strand 3
A
388 393anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
30 35parallel
Strand 3
B
38 50anti-parallel
Strand 4
B
135 143anti-parallel
Strand 5
B
160 164anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 26first strand
Strand 2
B
282 288anti-parallel
Strand 3
B
179 185anti-parallel
Strand 4
B
170 175anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 99first strand
Strand 2
B
109 129anti-parallel
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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 222first strand
Strand 2
B
54 72anti-parallel
Strand 3
B
109 129parallel
Strand 4
B
196 201anti-parallel
Strand 5
B
204 209anti-parallel
Strand 6
B
268 270anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 222first strand
Strand 2
B
54 72anti-parallel
Strand 3
B
109 129parallel
Strand 4
B
90 99anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 241first strand
Strand 2
B
249 252anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 273first strand
Strand 2
B
276 277anti-parallel
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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 314first strand
Strand 2
B
320 326anti-parallel
Strand 3
B
365 370anti-parallel
Strand 4
B
350 351anti-parallel
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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 334first strand
Strand 2
B
357 358anti-parallel
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There are 3 strands in BJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 338first strand
Strand 2
B
374 380anti-parallel
Strand 3
B
387 393anti-parallel
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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 4 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
116 120parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
111 112anti-parallel
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There are 6 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
116 120parallel
Strand 3
H
92 100anti-parallel
Strand 4
H
32 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 2 strands in HD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
111 112first strand
Strand 2
H
92 100anti-parallel
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There are 4 strands in HE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
129 133first strand
Strand 2
H
144 154anti-parallel
Strand 3
H
185 194anti-parallel
Strand 4
H
178 179parallel
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There are 4 strands in HF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
129 133first strand
Strand 2
H
144 154anti-parallel
Strand 3
H
185 194anti-parallel
Strand 4
H
172 174anti-parallel
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There are 2 strands in HG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
178 179first strand
Strand 2
H
185 194parallel
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There are 3 strands in HH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
160 163first strand
Strand 2
H
204 209anti-parallel
Strand 3
H
214 219anti-parallel
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There are 4 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
3 7first strand
Strand 2
I
18 25anti-parallel
Strand 3
I
78 83anti-parallel
Strand 4
I
68 73anti-parallel
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There are 4 strands in IB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
11 12first strand
Strand 2
I
116 120parallel
Strand 3
I
92 100anti-parallel
Strand 4
I
111 112anti-parallel
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There are 6 strands in IC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
11 12first strand
Strand 2
I
116 120parallel
Strand 3
I
92 100anti-parallel
Strand 4
I
32 39anti-parallel
Strand 5
I
45 51anti-parallel
Strand 6
I
58 60anti-parallel
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There are 2 strands in ID sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
111 112first strand
Strand 2
I
92 100anti-parallel
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There are 4 strands in IE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
129 133first strand
Strand 2
I
145 154anti-parallel
Strand 3
I
185 193anti-parallel
Strand 4
I
178 179parallel
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There are 4 strands in IF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
129 133first strand
Strand 2
I
145 154anti-parallel
Strand 3
I
185 193anti-parallel
Strand 4
I
172 174anti-parallel
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There are 2 strands in IG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
178 179first strand
Strand 2
I
185 193parallel
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There are 3 strands in IH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
160 163first strand
Strand 2
I
204 209anti-parallel
Strand 3
I
214 219anti-parallel
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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 6 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
103 107parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
115 119first strand
Strand 2
L
130 140anti-parallel
Strand 3
L
174 183anti-parallel
Strand 4
L
160 164anti-parallel
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There are 4 strands in LD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
154 155first strand
Strand 2
L
146 151anti-parallel
Strand 3
L
192 198anti-parallel
Strand 4
L
206 211anti-parallel
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There are 4 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
4 7first strand
Strand 2
M
19 25anti-parallel
Strand 3
M
70 75anti-parallel
Strand 4
M
62 67anti-parallel
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There are 6 strands in MB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 13first strand
Strand 2
M
103 107parallel
Strand 3
M
85 90anti-parallel
Strand 4
M
33 38anti-parallel
Strand 5
M
45 49anti-parallel
Strand 6
M
53 54anti-parallel
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There are 4 strands in MC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
115 119first strand
Strand 2
M
130 140anti-parallel
Strand 3
M
174 183anti-parallel
Strand 4
M
160 164anti-parallel
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There are 4 strands in MD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
154 155first strand
Strand 2
M
146 151anti-parallel
Strand 3
M
192 198anti-parallel
Strand 4
M
206 211anti-parallel
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