Analysis of interatomic Contacts of Structural Units in PDB entry:
4UX9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4UX9 entry

There are 8 chains in PDB entry 4UX9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 8LEU 363
B
 ASN 8ASP 362
C
 ASN 8LEU 363
D
 ASN 9GLU 364
F
 PRO 39ALA 48
G
 PRO 41ALA 48
H
 GLN 37ALA 48
I
 GLN 37LEU 47
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 4UX9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
63 80Right-handed alpha
Helix 2
2
A
115 120Right-handed alpha
Helix 3
3
A
124 145Right-handed alpha
Helix 4
4
A
153 155Right-handed 310
Helix 5
5
A
188 192Right-handed 310
Helix 6
6
A
193 198Right-handed alpha
Helix 7
7
A
205 221Right-handed alpha
Helix 8
8
A
231 242Right-handed alpha
Helix 9
9
A
245 250Right-handed alpha
Helix 10
10
A
253 262Right-handed alpha
Helix 11
11
A
270 275Right-handed alpha
Helix 12
12
A
276 280Right-handed 310
Helix 13
13
A
290 302Right-handed alpha
Helix 14
14
A
311 318Right-handed alpha
Helix 15
15
A
321 325Right-handed 310
Helix 16
16
A
326 331Right-handed alpha
Helix 17
17
A
348 363Right-handed alpha
Helix 18
18
B
60 62Right-handed 310
Helix 19
19
B
63 80Right-handed alpha
Helix 20
20
B
115 120Right-handed alpha
Helix 21
21
B
124 144Right-handed alpha
Helix 22
22
B
153 155Right-handed 310
Helix 23
23
B
188 192Right-handed 310
Helix 24
24
B
193 198Right-handed alpha
Helix 25
25
B
205 221Right-handed alpha
Helix 26
26
B
231 242Right-handed alpha
Helix 27
27
B
245 251Right-handed alpha
Helix 28
28
B
253 262Right-handed alpha
Helix 29
29
B
270 275Right-handed alpha
Helix 30
30
B
276 280Right-handed 310
Helix 31
31
B
290 302Right-handed alpha
Helix 32
32
B
305 309Right-handed 310
Helix 33
33
B
311 317Right-handed alpha
Helix 34
34
B
321 325Right-handed 310
Helix 35
35
B
326 331Right-handed alpha
Helix 36
36
B
353 362Right-handed alpha
Helix 37
37
C
63 80Right-handed alpha
Helix 38
38
C
115 120Right-handed alpha
Helix 39
39
C
124 145Right-handed alpha
Helix 40
40
C
153 155Right-handed 310
Helix 41
41
C
188 192Right-handed 310
Helix 42
42
C
193 198Right-handed alpha
Helix 43
43
C
205 221Right-handed alpha
Helix 44
44
C
231 242Right-handed alpha
Helix 45
45
C
245 250Right-handed alpha
Helix 46
46
C
253 263Right-handed alpha
Helix 47
47
C
270 275Right-handed alpha
Helix 48
48
C
276 280Right-handed 310
Helix 49
49
C
290 302Right-handed alpha
Helix 50
50
C
305 309Right-handed 310
Helix 51
51
C
311 317Right-handed alpha
Helix 52
52
C
321 325Right-handed 310
Helix 53
53
C
326 331Right-handed alpha
Helix 54
54
C
348 363Right-handed alpha
Helix 55
55
D
63 80Right-handed alpha
Helix 56
56
D
115 120Right-handed alpha
Helix 57
57
D
124 144Right-handed alpha
Helix 58
58
D
153 155Right-handed 310
Helix 59
59
D
193 198Right-handed alpha
Helix 60
60
D
205 221Right-handed alpha
Helix 61
61
D
231 242Right-handed alpha
Helix 62
62
D
245 250Right-handed alpha
Helix 63
63
D
253 263Right-handed alpha
Helix 64
64
D
270 275Right-handed alpha
Helix 65
65
D
276 280Right-handed 310
Helix 66
66
D
290 302Right-handed alpha
Helix 67
67
D
305 309Right-handed 310
Helix 68
68
D
311 318Right-handed alpha
Helix 69
69
D
321 325Right-handed 310
Helix 70
70
D
326 331Right-handed alpha
Helix 71
71
D
348 364Right-handed alpha
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There are 12 sheets in PDB entry 4UX9. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 15first strand
Strand 2
A
18 23anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 33first strand
Strand 2
A
39 45anti-parallel
Strand 3
A
50 57anti-parallel
Strand 4
A
104 109anti-parallel
Strand 5
A
88 92anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
157 159anti-parallel
Strand 3
A
165 167anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 15first strand
Strand 2
B
18 23anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 33first strand
Strand 2
B
40 45anti-parallel
Strand 3
B
50 58anti-parallel
Strand 4
B
103 109anti-parallel
Strand 5
B
88 92anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
157 160anti-parallel
Strand 3
B
164 167anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 15first strand
Strand 2
C
18 23anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 34first strand
Strand 2
C
39 45anti-parallel
Strand 3
C
50 58anti-parallel
Strand 4
C
103 109anti-parallel
Strand 5
C
88 92anti-parallel
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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
113 114first strand
Strand 2
C
157 159anti-parallel
Strand 3
C
165 167anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 15first strand
Strand 2
D
18 23anti-parallel
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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 31first strand
Strand 2
D
40 45anti-parallel
Strand 3
D
50 56anti-parallel
Strand 4
D
105 109anti-parallel
Strand 5
D
88 92anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
113 114first strand
Strand 2
D
157 159anti-parallel
Strand 3
D
165 167anti-parallel
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