Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for XXXX entry
There are 62 chains in PDB entry XXXX
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
U 141 | U 2008 |
B
|
U 1 | A 35 |
C
|
C 2 | G 33 |
D
|
U 1 | G 49 |
E
|
A 1 | U 33 |
F
|
U 1 | A 31 |
G
|
A 1 | G 25 |
H
|
G 1 | C 41 |
I
|
GLN 4 | GLN 311 |
J
|
GLU 12 | ARG 204 |
K
|
ALA 2 | ASP 193 |
L
|
ASP 52 | LEU 154 |
M
|
SER 9 | SER 157 |
N
|
ILE 17 | ARG 204 |
O
|
MET 4 | PHE 130 |
P
|
GLN 8 | ARG 146 |
Q
|
ARG 19 | THR 115 |
R
|
GLU 23 | ARG 147 |
S
|
GLN 26 | ARG 140 |
T
|
LEU 13 | LYS 152 |
U
|
LEU 6 | LYS 54 |
V
|
PRO 1 | GLY 85 |
W
|
ARG 71 | ALA 148 |
X
|
ARG 43 | ARG 130 |
Y
|
A 3 | U 144 |
Z
|
A 15 | G 5023 |
a
|
G 117 | C 137 |
b
|
G 145 | C 14 |
c
|
C 125 | G 141 |
d
|
C 1 | G 16 |
e
|
C 1 | G 60 |
f
|
C 1 | G 120 |
g
|
C 1 | G 51 |
h
|
C 1786 | G 1810 |
i
|
C 1 | G 72 |
j
|
G 1 | C 30 |
k
|
G 2453 | C 2478 |
l
|
U 2531 | A 2550 |
m
|
C 2676 | G 2694 |
n
|
G 1 | U 82 |
o
|
U 3965 | A 3984 |
p
|
G 4065 | C 4079 |
q
|
G 4091 | C 4120 |
r
|
U 1 | A 30 |
s
|
C 1 | G 42 |
t
|
C 1 | G 30 |
u
|
G 4972 | C 4987 |
v
|
G 1 | C 22 |
w
|
U 1 | A 16 |
x
|
A 272 | C 1565 |
y
|
U 2 | U 123 |
z
|
G 1 | C 75 |
0
|
GLY 2 | LEU 246 |
1
|
SER 6 | LEU 350 |
2
|
LEU 6 | LEU 262 |
3
|
ASN 10 | ILE 174 |
4
|
VAL 10 | LYS 184 |
5
|
PRO 104 | ARG 223 |
6
|
LEU 261 | ASP 308 |
7
|
ARG 3 | LYS 168 |
8
|
ILE 71 | ASP 144 |
9
|
LEU 6 | ALA 141 |
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There are no helices in PDB entry
XXXX
There are no sheets in PDB entry
XXXX
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
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