Analysis of interatomic Contacts of Structural Units in PDB entry:
4W1O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4W1O entry

There are 4 chains in PDB entry 4W1O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 90PRO 411
B
GLY 83PRO 411
C
GLU 87PRO 411
D
VAL 91PRO 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 88 helices in PDB entry 4W1O. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
90 96Right-handed alpha
Helix 2
AA2
A
97 101Right-handed 310
Helix 3
AA3
A
105 113Right-handed alpha
Helix 4
AA4
A
116 129Right-handed alpha
Helix 5
AA5
A
130 135Right-handed alpha
Helix 6
AA6
A
138 152Right-handed alpha
Helix 7
AA7
A
161 177Right-handed alpha
Helix 8
AA8
A
178 182Right-handed 310
Helix 9
AA9
A
186 200Right-handed alpha
Helix 10
AB1
A
208 215Right-handed alpha
Helix 11
AB2
A
217 223Right-handed alpha
Helix 12
AB3
A
227 240Right-handed alpha
Helix 13
AB4
A
241 243Right-handed 310
Helix 14
AB5
A
253 270Right-handed alpha
Helix 15
AB6
A
271 274Right-handed 310
Helix 16
AB7
A
275 289Right-handed alpha
Helix 17
AB8
A
302 319Right-handed alpha
Helix 18
AB9
A
320 324Right-handed 310
Helix 19
AC1
A
325 350Right-handed alpha
Helix 20
AC2
A
364 376Right-handed alpha
Helix 21
AC3
A
376 388Right-handed alpha
Helix 22
AC4
A
392 408Right-handed alpha
Helix 23
AC5
B
86 96Right-handed alpha
Helix 24
AC6
B
97 99Right-handed 310
Helix 25
AC7
B
105 113Right-handed alpha
Helix 26
AC8
B
116 129Right-handed alpha
Helix 27
AC9
B
130 135Right-handed alpha
Helix 28
AD1
B
138 152Right-handed alpha
Helix 29
AD2
B
161 177Right-handed alpha
Helix 30
AD3
B
178 182Right-handed 310
Helix 31
AD4
B
186 200Right-handed alpha
Helix 32
AD5
B
208 215Right-handed alpha
Helix 33
AD6
B
217 223Right-handed alpha
Helix 34
AD7
B
227 240Right-handed alpha
Helix 35
AD8
B
241 243Right-handed 310
Helix 36
AD9
B
253 270Right-handed alpha
Helix 37
AE1
B
271 274Right-handed 310
Helix 38
AE2
B
275 290Right-handed alpha
Helix 39
AE3
B
302 319Right-handed alpha
Helix 40
AE4
B
320 324Right-handed 310
Helix 41
AE5
B
325 350Right-handed alpha
Helix 42
AE6
B
364 376Right-handed alpha
Helix 43
AE7
B
376 388Right-handed alpha
Helix 44
AE8
B
392 410Right-handed alpha
Helix 45
AE9
C
88 96Right-handed alpha
Helix 46
AF1
C
97 101Right-handed 310
Helix 47
AF2
C
105 113Right-handed alpha
Helix 48
AF3
C
116 129Right-handed alpha
Helix 49
AF4
C
130 135Right-handed alpha
Helix 50
AF5
C
138 152Right-handed alpha
Helix 51
AF6
C
161 176Right-handed alpha
Helix 52
AF7
C
177 182Right-handed 310
Helix 53
AF8
C
186 200Right-handed alpha
Helix 54
AF9
C
208 215Right-handed alpha
Helix 55
AG1
C
217 224Right-handed alpha
Helix 56
AG2
C
227 240Right-handed alpha
Helix 57
AG3
C
241 243Right-handed 310
Helix 58
AG4
C
253 270Right-handed alpha
Helix 59
AG5
C
271 274Right-handed 310
Helix 60
AG6
C
275 289Right-handed alpha
Helix 61
AG7
C
302 319Right-handed alpha
Helix 62
AG8
C
320 324Right-handed 310
Helix 63
AG9
C
325 350Right-handed alpha
Helix 64
AH1
C
364 376Right-handed alpha
Helix 65
AH2
C
376 388Right-handed alpha
Helix 66
AH3
C
392 410Right-handed alpha
Helix 67
AH4
D
92 96Right-handed alpha
Helix 68
AH5
D
97 99Right-handed 310
Helix 69
AH6
D
105 113Right-handed alpha
Helix 70
AH7
D
116 129Right-handed alpha
Helix 71
AH8
D
130 136Right-handed alpha
Helix 72
AH9
D
138 152Right-handed alpha
Helix 73
AI1
D
161 177Right-handed alpha
Helix 74
AI2
D
178 182Right-handed 310
Helix 75
AI3
D
186 200Right-handed alpha
Helix 76
AI4
D
208 215Right-handed alpha
Helix 77
AI5
D
217 224Right-handed alpha
Helix 78
AI6
D
227 240Right-handed alpha
Helix 79
AI7
D
241 243Right-handed 310
Helix 80
AI8
D
253 270Right-handed alpha
Helix 81
AI9
D
271 274Right-handed 310
Helix 82
AJ1
D
275 289Right-handed alpha
Helix 83
AJ2
D
302 319Right-handed alpha
Helix 84
AJ3
D
320 324Right-handed 310
Helix 85
AJ4
D
325 351Right-handed alpha
Helix 86
AJ5
D
364 376Right-handed alpha
Helix 87
AJ6
D
376 388Right-handed alpha
Helix 88
AJ7
D
392 409Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4W1O

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il