Analysis of interatomic Contacts of Structural Units in PDB entry:
4WGF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WGF entry

There are 7 chains in PDB entry 4WGF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	THR 203
B	SER 2	THR 203
C	SER 2	THR 203
D	SER 2	THR 203
E	SER 2	THR 203
F	SER 2	THR 203
G	SER 2	PHE 76

There are 95 helices in PDB entry 4WGF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	28	Right-handed 310
Helix 2	AA2	A	32	50	Right-handed alpha
Helix 3	AA3	A	69	76	Right-handed alpha
Helix 4	AA4	A	89	92	Right-handed 310
Helix 5	AA5	A	93	103	Right-handed alpha
Helix 6	AA6	A	119	129	Right-handed alpha
Helix 7	AA7	A	138	140	Right-handed 310
Helix 8	AA8	A	144	159	Right-handed alpha
Helix 9	AA9	A	164	174	Right-handed alpha
Helix 10	AB1	A	175	178	Right-handed 310
Helix 11	AB2	A	179	191	Right-handed alpha
Helix 12	AB3	A	191	203	Right-handed alpha
Helix 13	AB4	B	23	28	Right-handed 310
Helix 14	AB5	B	32	50	Right-handed alpha
Helix 15	AB6	B	69	76	Right-handed alpha
Helix 16	AB7	B	89	92	Right-handed 310
Helix 17	AB8	B	93	103	Right-handed alpha
Helix 18	AB9	B	119	129	Right-handed alpha
Helix 19	AC1	B	138	140	Right-handed 310
Helix 20	AC2	B	144	157	Right-handed alpha
Helix 21	AC3	B	164	174	Right-handed alpha
Helix 22	AC4	B	175	178	Right-handed 310
Helix 23	AC5	B	179	191	Right-handed alpha
Helix 24	AC6	B	191	203	Right-handed alpha
Helix 25	AC7	C	23	28	Right-handed 310
Helix 26	AC8	C	32	50	Right-handed alpha
Helix 27	AC9	C	69	76	Right-handed alpha
Helix 28	AD1	C	89	92	Right-handed 310
Helix 29	AD2	C	93	103	Right-handed alpha
Helix 30	AD3	C	119	129	Right-handed alpha
Helix 31	AD4	C	138	140	Right-handed 310
Helix 32	AD5	C	144	159	Right-handed alpha
Helix 33	AD6	C	164	174	Right-handed alpha
Helix 34	AD7	C	175	178	Right-handed 310
Helix 35	AD8	C	179	191	Right-handed alpha
Helix 36	AD9	C	191	203	Right-handed alpha
Helix 37	AE1	D	23	28	Right-handed 310
Helix 38	AE2	D	32	50	Right-handed alpha
Helix 39	AE3	D	69	76	Right-handed alpha
Helix 40	AE4	D	89	92	Right-handed 310
Helix 41	AE5	D	93	103	Right-handed alpha
Helix 42	AE6	D	119	129	Right-handed alpha
Helix 43	AE7	D	138	140	Right-handed 310
Helix 44	AE8	D	144	159	Right-handed alpha
Helix 45	AE9	D	164	174	Right-handed alpha
Helix 46	AF1	D	175	178	Right-handed 310
Helix 47	AF2	D	179	191	Right-handed alpha
Helix 48	AF3	D	191	203	Right-handed alpha
Helix 49	AF4	E	23	28	Right-handed 310
Helix 50	AF5	E	32	50	Right-handed alpha
Helix 51	AF6	E	69	76	Right-handed alpha
Helix 52	AF7	E	89	92	Right-handed 310
Helix 53	AF8	E	93	103	Right-handed alpha
Helix 54	AF9	E	119	129	Right-handed alpha
Helix 55	AG1	E	138	140	Right-handed 310
Helix 56	AG2	E	144	157	Right-handed alpha
Helix 57	AG3	E	164	174	Right-handed alpha
Helix 58	AG4	E	175	178	Right-handed 310
Helix 59	AG5	E	179	191	Right-handed alpha
Helix 60	AG6	E	191	203	Right-handed alpha
Helix 61	AG7	F	23	28	Right-handed 310
Helix 62	AG8	F	32	50	Right-handed alpha
Helix 63	AG9	F	69	76	Right-handed alpha
Helix 64	AH1	F	89	92	Right-handed 310
Helix 65	AH2	F	93	103	Right-handed alpha
Helix 66	AH3	F	119	129	Right-handed alpha
Helix 67	AH4	F	138	140	Right-handed 310
Helix 68	AH5	F	144	157	Right-handed alpha
Helix 69	AH6	F	164	174	Right-handed alpha
Helix 70	AH7	F	175	178	Right-handed 310
Helix 71	AH8	F	179	191	Right-handed alpha
Helix 72	AH9	F	191	203	Right-handed alpha
Helix 73	AI1	G	23	28	Right-handed 310
Helix 74	AI2	G	32	50	Right-handed alpha
Helix 75	AI3	G	69	76	Right-handed alpha
Helix 76	AI4	G	89	92	Right-handed 310
Helix 77	AI5	G	93	103	Right-handed alpha
Helix 78	AI6	G	119	129	Right-handed alpha
Helix 79	AI7	G	144	159	Right-handed alpha
Helix 80	AI8	G	164	174	Right-handed alpha
Helix 81	AI9	G	175	178	Right-handed 310
Helix 82	AJ1	G	179	191	Right-handed alpha
Helix 83	AJ2	G	191	203	Right-handed alpha
Helix 84	AJ3	H	23	28	Right-handed 310
Helix 85	AJ4	H	32	50	Right-handed alpha
Helix 86	AJ5	H	69	76	Right-handed alpha
Helix 87	AJ6	H	89	92	Right-handed 310
Helix 88	AJ7	H	93	103	Right-handed alpha
Helix 89	AJ8	H	119	129	Right-handed alpha
Helix 90	AJ9	H	138	140	Right-handed 310
Helix 91	AK1	H	144	159	Right-handed alpha
Helix 92	AK2	H	164	174	Right-handed alpha
Helix 93	AK3	H	175	178	Right-handed 310
Helix 94	AK4	H	179	191	Right-handed alpha
Helix 95	AK5	H	191	203	Right-handed alpha

There are 8 sheets in PDB entry 4WGF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	84	first strand
Strand 2	A	54	59	parallel
Strand 3	A	13	18	parallel
Strand 4	A	107	112	parallel
Strand 5	A	132	136	parallel
Strand 6	A	161	163	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	84	first strand
Strand 2	B	54	59	parallel
Strand 3	B	13	18	parallel
Strand 4	B	107	112	parallel
Strand 5	B	132	136	parallel
Strand 6	B	161	163	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	84	first strand
Strand 2	C	54	59	parallel
Strand 3	C	13	18	parallel
Strand 4	C	107	112	parallel
Strand 5	C	132	136	parallel
Strand 6	C	161	163	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	84	first strand
Strand 2	D	54	59	parallel
Strand 3	D	13	18	parallel
Strand 4	D	107	112	parallel
Strand 5	D	132	136	parallel
Strand 6	D	161	163	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	84	first strand
Strand 2	E	54	59	parallel
Strand 3	E	13	18	parallel
Strand 4	E	107	112	parallel
Strand 5	E	132	136	parallel
Strand 6	E	161	163	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	84	first strand
Strand 2	F	54	59	parallel
Strand 3	F	13	18	parallel
Strand 4	F	107	112	parallel
Strand 5	F	132	136	parallel
Strand 6	F	161	163	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	81	84	first strand
Strand 2	G	54	59	parallel
Strand 3	G	13	18	parallel
Strand 4	G	107	112	parallel
Strand 5	G	132	136	parallel
Strand 6	G	161	163	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	81	84	first strand
Strand 2	H	54	59	parallel
Strand 3	H	13	18	parallel
Strand 4	H	107	112	parallel
Strand 5	H	132	136	parallel
Strand 6	H	161	163	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WGF

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WGF