Analysis of interatomic Contacts of Structural Units in PDB entry:
4WIJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WIJ entry

There are 2 chains in PDB entry 4WIJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 292MET 589
B
 THR 292GLN 592
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4WIJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
309 317Right-handed alpha
Helix 2
AA2
A
318 321Right-handed 310
Helix 3
AA3
A
341 353Right-handed alpha
Helix 4
AA4
A
383 392Right-handed alpha
Helix 5
AA5
A
420 434Right-handed alpha
Helix 6
AA6
A
460 464Right-handed 310
Helix 7
AA7
A
468 475Right-handed alpha
Helix 8
AA8
A
485 494Right-handed alpha
Helix 9
AA9
A
494 553Right-handed alpha
Helix 10
AB1
A
554 589Right-handed alpha
Helix 11
AB2
B
309 319Right-handed alpha
Helix 12
AB3
B
341 353Right-handed alpha
Helix 13
AB4
B
383 391Right-handed alpha
Helix 14
AB5
B
392 394Right-handed 310
Helix 15
AB6
B
420 434Right-handed alpha
Helix 16
AB7
B
460 464Right-handed 310
Helix 17
AB8
B
485 590Right-handed alpha
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There are 6 sheets in PDB entry 4WIJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 329first strand
Strand 2
A
334 337anti-parallel
Strand 3
A
299 302anti-parallel
Strand 4
A
363 366anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 357first strand
Strand 2
A
360 361anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 404first strand
Strand 2
A
410 418anti-parallel
Strand 3
A
372 376anti-parallel
Strand 4
A
446 449anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 437first strand
Strand 2
B
479 480anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
335 337first strand
Strand 2
B
299 302anti-parallel
Strand 3
B
363 366anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 404first strand
Strand 2
B
410 418anti-parallel
Strand 3
B
372 376anti-parallel
Strand 4
B
446 449anti-parallel
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