Analysis of interatomic Contacts of Structural Units in PDB entry:
4WIO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WIO entry

There is 1 chain in PDB entry 4WIO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7GLU 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4WIO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 29Right-handed alpha
Helix 2
AA2
A
42 47Right-handed alpha
Helix 3
AA3
A
71 79Right-handed alpha
Helix 4
AA4
A
89 99Right-handed alpha
Helix 5
AA5
A
122 127Right-handed 310
Helix 6
AA6
A
129 133Right-handed 310
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
216 226Right-handed alpha
Helix 9
AA9
A
240 249Right-handed alpha
Helix 10
AB1
A
250 252Right-handed 310
Helix 11
AB2
A
264 269Right-handed alpha
Helix 12
AB3
A
270 278Right-handed alpha
Helix 13
AB4
A
295 308Right-handed alpha
Helix 14
AB5
A
318 327Right-handed alpha
Helix 15
AB6
A
331 352Right-handed alpha
Helix 16
AB7
A
368 377Right-handed alpha
Helix 17
AB8
A
410 421Right-handed alpha
Helix 18
AB9
A
425 430Right-handed alpha
Helix 19
AC1
A
436 442Right-handed 310
Helix 20
AC2
A
447 468Right-handed alpha
Helix 21
AC3
A
470 474Right-handed 310
Helix 22
AC4
A
519 534Right-handed alpha
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There are 4 sheets in PDB entry 4WIO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
8 13parallel
Strand 3
A
50 55parallel
Strand 4
A
85 88parallel
Strand 5
A
202 205parallel
Strand 6
A
190 197anti-parallel
Strand 7
A
182 187anti-parallel
Strand 8
A
102 118anti-parallel
Strand 9
A
163 176anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 316first strand
Strand 2
A
282 287parallel
Strand 3
A
256 261parallel
Strand 4
A
361 364parallel
Strand 5
A
401 403parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 482first strand
Strand 2
A
498 509anti-parallel
Strand 3
A
512 515anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 482first strand
Strand 2
A
498 509anti-parallel
Strand 3
A
537 542parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il