Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WJL entry

There are 2 chains in PDB entry 4WJL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 66	LYS 782
B	SER 65	GLU 783

There are 24 helices in PDB entry 4WJL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	70	75	Right-handed alpha
Helix 2	AA2	A	228	234	Right-handed alpha
Helix 3	AA3	A	518	528	Right-handed alpha
Helix 4	AA4	A	583	591	Right-handed alpha
Helix 5	AA5	A	611	616	Right-handed 310
Helix 6	AA6	A	620	636	Right-handed alpha
Helix 7	AA7	A	651	661	Right-handed alpha
Helix 8	AA8	A	679	683	Right-handed 310
Helix 9	AA9	A	684	693	Right-handed alpha
Helix 10	AB1	A	700	705	Right-handed alpha
Helix 11	AB2	A	732	745	Right-handed alpha
Helix 12	AB3	A	762	781	Right-handed alpha
Helix 13	AB4	B	70	75	Right-handed alpha
Helix 14	AB5	B	228	234	Right-handed alpha
Helix 15	AB6	B	518	528	Right-handed alpha
Helix 16	AB7	B	583	591	Right-handed alpha
Helix 17	AB8	B	611	616	Right-handed 310
Helix 18	AB9	B	620	636	Right-handed alpha
Helix 19	AC1	B	651	661	Right-handed alpha
Helix 20	AC2	B	679	683	Right-handed 310
Helix 21	AC3	B	684	693	Right-handed alpha
Helix 22	AC4	B	700	705	Right-handed alpha
Helix 23	AC5	B	732	745	Right-handed alpha
Helix 24	AC6	B	762	781	Right-handed alpha

There are 22 sheets in PDB entry 4WJL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	94	first strand
Strand 2	A	103	107	anti-parallel
Strand 3	A	113	117	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	132	first strand
Strand 2	A	138	147	anti-parallel
Strand 3	A	153	161	anti-parallel
Strand 4	A	167	170	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	196	first strand
Strand 2	A	199	203	anti-parallel
Strand 3	A	211	212	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	224	first strand
Strand 2	A	250	257	anti-parallel
Strand 3	A	242	244	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	224	first strand
Strand 2	A	250	257	anti-parallel
Strand 3	A	291	298	anti-parallel
Strand 4	A	306	307	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	265	first strand
Strand 2	A	279	281	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	326	first strand
Strand 2	A	331	338	anti-parallel
Strand 3	A	343	350	anti-parallel
Strand 4	A	355	363	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	377	first strand
Strand 2	A	384	390	anti-parallel
Strand 3	A	398	402	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	431	first strand
Strand 2	A	437	442	anti-parallel
Strand 3	A	451	456	anti-parallel
Strand 4	A	463	465	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	482	first strand
Strand 2	A	488	492	anti-parallel
Strand 3	A	501	505	anti-parallel
Strand 4	A	513	516	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	540	first strand
Strand 2	A	543	550	anti-parallel
Strand 3	A	594	599	anti-parallel
Strand 4	A	561	566	parallel
Strand 5	A	640	650	parallel
Strand 6	A	670	674	parallel
Strand 7	A	718	724	parallel
Strand 8	A	749	754	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	94	first strand
Strand 2	B	103	107	anti-parallel
Strand 3	B	113	117	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	132	first strand
Strand 2	B	138	147	anti-parallel
Strand 3	B	153	161	anti-parallel
Strand 4	B	167	170	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	196	first strand
Strand 2	B	199	203	anti-parallel
Strand 3	B	211	212	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	224	first strand
Strand 2	B	250	257	anti-parallel
Strand 3	B	242	244	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	224	first strand
Strand 2	B	250	257	anti-parallel
Strand 3	B	291	298	anti-parallel
Strand 4	B	306	307	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	265	first strand
Strand 2	B	279	281	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	326	first strand
Strand 2	B	331	338	anti-parallel
Strand 3	B	343	350	anti-parallel
Strand 4	B	355	363	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	377	first strand
Strand 2	B	384	390	anti-parallel
Strand 3	B	398	402	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	431	first strand
Strand 2	B	437	442	anti-parallel
Strand 3	B	451	456	anti-parallel
Strand 4	B	463	465	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	482	first strand
Strand 2	B	488	492	anti-parallel
Strand 3	B	501	505	anti-parallel
Strand 4	B	513	516	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	540	first strand
Strand 2	B	543	550	anti-parallel
Strand 3	B	594	599	anti-parallel
Strand 4	B	561	566	parallel
Strand 5	B	640	650	parallel
Strand 6	B	670	674	parallel
Strand 7	B	718	724	parallel
Strand 8	B	749	754	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WJL

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJL